Identifying novel transcript biomarkers for hepatocellular carcinoma (HCC) using RNA-Seq datasets and machine learning

por Gupta, Rajinder, Kleinjans, Jos, Caiment, Florian
Publicado 2021

DTW4Omics: Comparing Patterns in Biological Time Series

por Cavill, Rachel, Kleinjans, Jos, Briedé, Jacob-Jan
Publicado 2013

High-throughput data integration of RNA–miRNA–circRNA reveals novel insights into mechanisms of benzo[a]pyrene-induced carcinogenicity

por Caiment, Florian, Gaj, Stan, Claessen, Sandra, Kleinjans, Jos
Publicado 2015

Transcriptome analysis of long noncoding RNAs reveals their potential roles in anthracycline-induced cardiotoxicity

por Nguyen, Nhan, Souza, Terezinha, Kleinjans, Jos, Jennen, Danyel
Publicado 2022

Dose and Time Dependencies in Stress Pathway Responses during Chemical Exposure: Novel Insights from Gene Regulatory Networks

por Souza, Terezinha M., Kleinjans, Jos C. S., Jennen, Danyel G. J.
Publicado 2017

Moving Forward in Human Cancer Risk Assessment

por Paules, Richard S., Aubrecht, Jiri, Corvi, Raffaella, Garthoff, Bernward, Kleinjans, Jos C.
Publicado 2011

Workshop report: Identifying opportunities for global integration of toxicogenomics databases, 26–27 June 2013, Research Triangle Park, NC, USA

por Hendrickx, Diana M., Boyles, Rebecca R., Kleinjans, Jos C. S., Dearry, Allen
Publicado 2014

MagiCMicroRna: a web implementation of AgiMicroRna using shiny

por Coonen, Maarten LJ, Theunissen, Daniel HJ, Kleinjans, Jos CS, Jennen, Danyel GJ
Publicado 2015

DTNI: a novel toxicogenomics data analysis tool for identifying the molecular mechanisms underlying the adverse effects of toxic compounds

por Hendrickx, Diana M., Souza, Terezinha, Jennen, Danyel G. J., Kleinjans, Jos C. S.
Publicado 2016

FuSe: a tool to move RNA-Seq analyses from chromosomal/gene loci to functional grouping of mRNA transcripts

por Gupta, Rajinder, Schrooders, Yannick, Verheijen, Marcha, Roth, Adrian, Kleinjans, Jos, Caiment, Florian
Publicado 2020

Multi-omics HeCaToS dataset of repeated dose toxicity for cardiotoxic & hepatotoxic compounds

por Verheijen, Marcha, Sarkans, Ugis, Wolski, Witold, Jennen, Danyel, Caiment, Florian, Kleinjans, Jos
Publicado 2022

New insights into BaP-induced toxicity: role of major metabolites in transcriptomics and contribution to hepatocarcinogenesis

por Souza, Terezinha, Jennen, Danyel, van Delft, Joost, van Herwijnen, Marcel, Kyrtoupolos, Soterios, Kleinjans, Jos
Publicado 2015

Metabolomic analysis to discriminate drug-induced liver injury (DILI) phenotypes

por Quintás, Guillermo, Martínez-Sena, Teresa, Conde, Isabel, Pareja Ibars, Eugenia, Kleinjans, Jos, Castell, José V.
Publicado 2021

An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin

por Ruiz-Aracama, Ainhoa, Peijnenburg, Ad, Kleinjans, Jos, Jennen, Danyel, van Delft, Joost, Hellfrisch, Caroline, Lommen, Arjen
Publicado 2011

Integrating transcriptomics and metabonomics to unravel modes-of-action of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in HepG2 cells

por Jennen, Danyel, Ruiz-Aracama, Ainhoa, Magkoufopoulou, Christina, Peijnenburg, Ad, Lommen, Arjen, van Delft, Joost, Kleinjans, Jos
Publicado 2011

Rationale for Environmental Hygiene towards global protection of fetuses and young children from adverse lifestyle factors

por Bourguignon, Jean-Pierre, Parent, Anne-Simone, Kleinjans, Jos C. S., Nawrot, Tim S., Schoeters, Greet, Van Larebeke, Nicolas
Publicado 2018

Embracing the Dark Side: Computational Approaches to Unveil the Functionality of Genes Lacking Biological Annotation in Drug-Induced Liver Injury

por Souza, Terezinha, Trairatphisan, Panuwat, Piñero, Janet, Furlong, Laura I., Saez-Rodriguez, Julio, Kleinjans, Jos, Jennen, Danyel
Publicado 2018

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining

por Hettne, Kristina M, Williams, Antony J, van Mulligen, Erik M, Kleinjans, Jos, Tkachenko, Valery, Kors, Jan A
Publicado 2010

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining

por Hettne, Kristina M, Williams, Antony J, van Mulligen, Erik M, Kleinjans, Jos, Tkachenko, Valery, Kors, Jan A
Publicado 2010

Data on novel DNA methylation changes induced by valproic acid in human hepatocytes

por Wolters, JarnoEJ, van Breda, SimoneGJ, Claessen, SandraM, de Kok, TheoMCM, Kleinjans, JosCS
Publicado 2017