Clustered Regularly Interspaced Short Palindromic Repeats in Xanthomonas citri—Witnesses to a Global Expansion of a Bacterial Pathogen over Time

por Bellanger, Ninon, Dereeper, Alexis, Koebnik, Ralf
Publicado 2022

Development of two loop-mediated isothermal amplification (LAMP) genomics-informed diagnostic protocols for rapid detection of Pantoea species on rice

por Kini, Kossi, Wonni, Issa, Silué, Drissa, Koebnik, Ralf
Publicado 2021

Comparative genomics of a cannabis pathogen reveals insight into the evolution of pathogenicity in Xanthomonas

por Jacobs, Jonathan M., Pesce, Céline, Lefeuvre, Pierre, Koebnik, Ralf
Publicado 2015

Draft Genome Sequences of Two Xanthomonas euvesicatoria Strains from the Balkan Peninsula

por Vancheva, Taca, Lefeuvre, Pierre, Bogatzevska, Nevena, Moncheva, Penka, Koebnik, Ralf
Publicado 2015

Draft Genome Sequences of Two Xanthomonas vesicatoria Strains from the Balkan Peninsula

por Vancheva, Taca, Bogatzevska, Nevena, Moncheva, Penka, Lefeuvre, Pierre, Koebnik, Ralf
Publicado 2015

Effector Mimics and Integrated Decoys, the Never-Ending Arms Race between Rice and Xanthomonas oryzae

por Zuluaga, Paola, Szurek, Boris, Koebnik, Ralf, Kroj, Thomas, Morel, Jean-Benoit
Publicado 2017

Integrating Science on Xanthomonas and Xylella for Integrated Plant Disease Management

por Costa, Joana, Pothier, Joël F., Boch, Jens, Stefani, Emilio, Koebnik, Ralf
Publicado 2022

Molecular Epidemiology of Xanthomonas euvesicatoria Strains from the Balkan Peninsula Revealed by a New Multiple-Locus Variable-Number Tandem-Repeat Analysis Scheme

por Vancheva, Taca, Bogatzevska, Nevena, Moncheva, Penka, Mitrev, Sasa, Vernière, Christian, Koebnik, Ralf
Publicado 2021

Editorial: Population and comparative genomics of plant pathogenic bacteria

por Timilsina, Sujan, Goss, Erica M., Koebnik, Ralf, Potnis, Neha, Jones, Jeffrey B.
Publicado 2022

A TonB-dependent transporter is required for secretion of protease PopC across the bacterial outer membrane

por Gómez-Santos, Nuria, Glatter, Timo, Koebnik, Ralf, Świątek-Połatyńska, Magdalena Anna, Søgaard-Andersen, Lotte
Publicado 2019

Phylogenetic distribution and evolutionary dynamics of nod and T3SS genes in the genus Bradyrhizobium

por Teulet, Albin, Gully, Djamel, Rouy, Zoe, Camuel, Alicia, Koebnik, Ralf, Giraud, Eric, Lassalle, Florent
Publicado 2020

Comparative Genomics Identifies a Novel Conserved Protein, HpaT, in Proteobacterial Type III Secretion Systems that Do Not Possess the Putative Translocon Protein HrpF

por Pesce, Céline, Jacobs, Jonathan M., Berthelot, Edwige, Perret, Marion, Vancheva, Taca, Bragard, Claude, Koebnik, Ralf
Publicado 2017

Complete Genome Sequence of Xanthomonas campestris pv. campestris SB80, a Race 4 Strain Isolated from White Head Cabbage in Turkey

por Erken Meral, Songül, Bibi, Shaheen, Díaz Rodríguez, Carlos Andrés, Menković, Jelena, Bernal, Adriana J., Koebnik, Ralf
Publicado 2022

An Improved Method for TAL Effectors DNA-Binding Sites Prediction Reveals Functional Convergence in TAL Repertoires of Xanthomonas oryzae Strains

por Pérez-Quintero, Alvaro L., Rodriguez-R, Luis M., Dereeper, Alexis, López, Camilo, Koebnik, Ralf, Szurek, Boris, Cunnac, Sebastien
Publicado 2013

AnnoTALE: bioinformatics tools for identification, annotation, and nomenclature of TALEs from Xanthomonas genomic sequences

por Grau, Jan, Reschke, Maik, Erkes, Annett, Streubel, Jana, Morgan, Richard D., Wilson, Geoffrey G., Koebnik, Ralf, Boch, Jens
Publicado 2016

Complete Genome Assemblies of All Xanthomonas translucens Pathotype Strains Reveal Three Genetically Distinct Clades

por Goettelmann, Florian, Roman-Reyna, Veronica, Cunnac, Sébastien, Jacobs, Jonathan M., Bragard, Claude, Studer, Bruno, Koebnik, Ralf, Kölliker, Roland
Publicado 2022

Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers

por Trujillo, César A, Arias-Rojas, Nathalia, Poulin, Lucie, Medina, César A, Tapiero, Anibal, Restrepo, Silvia, Koebnik, Ralf, Bernal, Adriana J
Publicado 2014

Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors

por Barak, Jeri D., Vancheva, Taca, Lefeuvre, Pierre, Jones, Jeffrey B., Timilsina, Sujan, Minsavage, Gerald V., Vallad, Gary E., Koebnik, Ralf
Publicado 2016

High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero

por Osdaghi, Ebrahim, Forero Serna, Natalia, Bolot, Stephanie, Fischer-Le Saux, Marion, Jacques, Marie-Agnès, Portier, Perrine, Carrère, Sébastien, Koebnik, Ralf
Publicado 2017

Xanthomonas hortorum – beyond gardens: Current taxonomy, genomics, and virulence repertoires

por Dia, Nay C., Morinière, Lucas, Cottyn, Bart, Bernal, Eduardo, Jacobs, Jonathan M., Koebnik, Ralf, Osdaghi, Ebrahim, Potnis, Neha, Pothier, Joël F.
Publicado 2022