Spatial Simulations in Systems Biology: From Molecules to Cells

por Klann, Michael, Koeppl, Heinz
Publicado 2012

Uncoupled Analysis of Stochastic Reaction Networks in Fluctuating Environments

por Zechner, Christoph, Koeppl, Heinz
Publicado 2014

Graph reconstruction using covariance-based methods

por Sulaimanov, Nurgazy, Koeppl, Heinz
Publicado 2016

Spatial Modeling of Vesicle Transport and the Cytoskeleton: The Challenge of Hitting the Right Road

por Klann, Michael, Koeppl, Heinz, Reuss, Matthias
Publicado 2012

Effect of Network Architecture on Synchronization and Entrainment Properties of the Circadian Oscillations in the Suprachiasmatic Nucleus

por Hafner, Marc, Koeppl, Heinz, Gonze, Didier
Publicado 2012

Hybrid spatial Gillespie and particle tracking simulation

por Klann, Michael, Ganguly, Arnab, Koeppl, Heinz
Publicado 2012

Mapping behavioral specifications to model parameters in synthetic biology

por Koeppl, Heinz, Hafner, Marc, Lu, James
Publicado 2013

Bye bye, linearity, bye: quantification of the mean for linear CRNs in a random environment

por Sinzger-D’Angelo, Mark, Startceva, Sofia, Koeppl, Heinz
Publicado 2023

‘Glocal’ Robustness Analysis and Model Discrimination for Circadian Oscillators

por Hafner, Marc, Koeppl, Heinz, Hasler, Martin, Wagner, Andreas
Publicado 2009

Automated Design of Robust Genetic Circuits: Structural Variants and Parameter Uncertainty

por Schladt, Tobias, Engelmann, Nicolai, Kubaczka, Erik, Hochberger, Christian, Koeppl, Heinz
Publicado 2021

Context-Aware Technology Mapping in Genetic Design Automation

por Engelmann, Nicolai, Schwarz, Tobias, Kubaczka, Erik, Hochberger, Christian, Koeppl, Heinz
Publicado 2023

Bayesian analysis dissects kinetic modulation during non-stationary gene expression

por Wildner, Christian, Mehta, Gunjan D., Ball, David A., Karpova, Tatiana S., Koeppl, Heinz
Publicado 2023

Stabilized Reconstruction of Signaling Networks from Single-Cell Cue-Response Data

por Kumar, Sunil, Lun, Xiao-Kang, Bodenmiller, Bernd, Rodríguez Martínez, María, Koeppl, Heinz
Publicado 2020

A tightly regulated and adjustable CRISPR-dCas9 based AND gate in yeast

por Hofmann, Anja, Falk, Johannes, Prangemeier, Tim, Happel, Dominic, Köber, Adrian, Christmann, Andreas, Koeppl, Heinz, Kolmar, Harald
Publicado 2019

From microscopy data to in silico environments for in vivo-oriented simulations

por Hiroi1, Noriko, Klann, Michael, Iba, Keisuke, Heras Ciechomski, Pablo de, Yamashita, Shuji, Tabira, Akito, Okuhara, Takahiro, Kubojima, Takeshi, Okada, Yasunori, Oka, Kotaro, Mange, Robin, Unger, Michael, Funahashi, Akira, Koeppl, Heinz
Publicado 2012

Inferring causal molecular networks: empirical assessment through a community-based effort

por Hill, Steven M, Heiser, Laura M, Cokelaer, Thomas, Unger, Michael, Nesser, Nicole K, Carlin, Daniel E, Zhang, Yang, Sokolov, Artem, Paull, Evan O, Wong, Chris K, Graim, Kiley, Bivol, Adrian, Wang, Haizhou, Zhu, Fan, Afsari, Bahman, Danilova, Ludmila V, Favorov, Alexander V, Lee, Wai Shing, Taylor, Dane, Hu, Chenyue W, Long, Byron L, Noren, David P, Bisberg, Alexander J, Mills, Gordon B, Gray, Joe W, Kellen, Michael, Norman, Thea, Friend, Stephen, Qutub, Amina A, Fertig, Elana J, Guan, Yuanfang, Song, Mingzhou, Stuart, Joshua M, Spellman, Paul T, Koeppl, Heinz, Stolovitzky, Gustavo, Saez-Rodriguez, Julio, Mukherjee, Sach
Publicado 2016