Massively parallel whole genome amplification for single-cell sequencing using droplet microfluidics

por Hosokawa, Masahito, Nishikawa, Yohei, Kogawa, Masato, Takeyama, Haruko
Publicado 2017

Obtaining high-quality draft genomes from uncultured microbes by cleaning and co-assembly of single-cell amplified genomes

por Kogawa, Masato, Hosokawa, Masahito, Nishikawa, Yohei, Mori, Kazuki, Takeyama, Haruko
Publicado 2018

Revealing within-species diversity in uncultured human gut bacteria with single-cell long-read sequencing

por Kogawa, Masato, Nishikawa, Yohei, Saeki, Tatsuya, Yoda, Takuya, Arikawa, Koji, Takeyama, Haruko, Hosokawa, Masahito
Publicado 2023

High-Quality Draft Genome Sequence of a Rickettsiales Bacterium Found in Acropora tenuis Coral from Okinawa, Japan

por Ide, Keigo, Nishikawa, Yohei, Kogawa, Masato, Iwamoto, Eisuke, Samuel, Ashok Zachariah, Nakano, Yoshikatsu, Takeyama, Haruko
Publicado 2020

Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota

por Chijiiwa, Rieka, Hosokawa, Masahito, Kogawa, Masato, Nishikawa, Yohei, Ide, Keigo, Sakanashi, Chikako, Takahashi, Kai, Takeyama, Haruko
Publicado 2020

Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics

por Arikawa, Koji, Ide, Keigo, Kogawa, Masato, Saeki, Tatsuya, Yoda, Takuya, Endoh, Taruho, Matsuhashi, Ayumi, Takeyama, Haruko, Hosokawa, Masahito
Publicado 2021

Strain-level profiling of viable microbial community by selective single-cell genome sequencing

por Hosokawa, Masahito, Endoh, Taruho, Kamata, Kazuma, Arikawa, Koji, Nishikawa, Yohei, Kogawa, Masato, Saeki, Tatsuya, Yoda, Takuya, Takeyama, Haruko
Publicado 2022

High-throughput identification of peptide agonists against GPCRs by co-culture of mammalian reporter cells and peptide-secreting yeast cells using droplet microfluidics

por Yaginuma, Kenshi, Aoki, Wataru, Miura, Natsuko, Ohtani, Yuta, Aburaya, Shunsuke, Kogawa, Masato, Nishikawa, Yohei, Hosokawa, Masahito, Takeyama, Haruko, Ueda, Mitsuyoshi
Publicado 2019

Massively parallel single-cell genomics of microbiomes in rice paddies

por Aoki, Wataru, Kogawa, Masato, Matsuda, Shuhei, Matsubara, Keisuke, Hirata, Shintaro, Nishikawa, Yohei, Hosokawa, Masahito, Takeyama, Haruko, Matoh, Toru, Ueda, Mitsuyoshi
Publicado 2022

Draft Genome Sequence of Okeania sp. Strain KiyG1, Assembled from Single-Amplified Genomes Collected from Cape Kiyan, Okinawa, Japan

por Lewaru, Muhammad Wahyudin, Nishikawa, Yohei, Ide, Keigo, Kogawa, Masato, Hosokawa, Masahito, Samuel, Ashok Zachariah, Sumimoto, Shinpei, Nuryadi, Handung, Suda, Shoichiro, Takeyama, Haruko
Publicado 2020

Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater

por Nishikawa, Yohei, Kogawa, Masato, Hosokawa, Masahito, Wagatsuma, Ryota, Mineta, Katsuhiko, Takahashi, Kai, Ide, Keigo, Yura, Kei, Behzad, Hayedeh, Gojobori, Takashi, Takeyama, Haruko
Publicado 2022

Cancer Cachexia among Patients with Advanced Non-Small-Cell Lung Cancer on Immunotherapy: An Observational Study with Exploratory Gut Microbiota Analysis

por Hakozaki, Taiki, Nolin-Lapalme, Alexis, Kogawa, Masato, Okuma, Yusuke, Nakamura, Shohei, Moreau-Amaru, Danielle, Tamura, Taichi, Hosomi, Yukio, Takeyama, Haruko, Richard, Corentin, Hosokawa, Masahito, Routy, Bertrand
Publicado 2022

Combined actions of bacteriophage-encoded genes in Wolbachia-induced male lethality

por Arai, Hiroshi, Anbutsu, Hisashi, Nishikawa, Yohei, Kogawa, Masato, Ishii, Kazuo, Hosokawa, Masahito, Lin, Shiou-Ruei, Ueda, Masatoshi, Nakai, Madoka, Kunimi, Yasuhisa, Harumoto, Toshiyuki, Kageyama, Daisuke, Takeyama, Haruko, Inoue, Maki N.
Publicado 2023

Dietary Vitamin B1 Intake Influences Gut Microbial Community and the Consequent Production of Short-Chain Fatty Acids

por Park, Jonguk, Hosomi, Koji, Kawashima, Hitoshi, Chen, Yi-An, Mohsen, Attayeb, Ohno, Harumi, Konishi, Kana, Tanisawa, Kumpei, Kifushi, Masako, Kogawa, Masato, Takeyama, Haruko, Murakami, Haruka, Kubota, Tetsuya, Miyachi, Motohiko, Kunisawa, Jun, Mizuguchi, Kenji
Publicado 2022

Targeted single-cell genomics reveals novel host adaptation strategies of the symbiotic bacteria Endozoicomonas in Acropora tenuis coral

por Ide, Keigo, Nishikawa, Yohei, Maruyama, Toru, Tsukada, Yuko, Kogawa, Masato, Takeda, Hiroki, Ito, Haruka, Wagatsuma, Ryota, Miyaoka, Rimi, Nakano, Yoshikatsu, Kinjo, Koji, Ito, Michihiro, Hosokawa, Masahito, Yura, Kei, Suda, Shoichiro, Takeyama, Haruko
Publicado 2022

Single-cell metabolite detection and genomics reveals uncultivated talented producer

por Kogawa, Masato, Miyaoka, Rimi, Hemmerling, Franziska, Ando, Masahiro, Yura, Kei, Ide, Keigo, Nishikawa, Yohei, Hosokawa, Masahito, Ise, Yuji, Cahn, Jackson K B, Takada, Kentaro, Matsunaga, Shigeki, Mori, Tetsushi, Piel, Jörn, Takeyama, Haruko
Publicado 2022