Memory persistence and differentiation into antibody-secreting cells accompanied by positive selection in longitudinal BCR repertoires

por Mikelov, Artem, Alekseeva, Evgeniia I, Komech, Ekaterina A, Staroverov, Dmitry B, Turchaninova, Maria A, Shugay, Mikhail, Chudakov, Dmitriy M, Bazykin, Georgii A, Zvyagin, Ivan V
Publicado 2022

tcR: an R package for T cell receptor repertoire advanced data analysis

por Nazarov, Vadim I., Pogorelyy, Mikhail V., Komech, Ekaterina A., Zvyagin, Ivan V., Bolotin, Dmitry A., Shugay, Mikhail, Chudakov, Dmitry M., Lebedev, Yury B., Mamedov, Ilgar Z.
Publicado 2015

Primary and secondary anti-viral response captured by the dynamics and phenotype of individual T cell clones

por Minervina, Anastasia A, Pogorelyy, Mikhail V, Komech, Ekaterina A, Karnaukhov, Vadim K, Bacher, Petra, Rosati, Elisa, Franke, Andre, Chudakov, Dmitriy M, Mamedov, Ilgar Z, Lebedev, Yuri B, Mora, Thierry, Walczak, Aleksandra M
Publicado 2020

Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires

por Pogorelyy, Mikhail V., Elhanati, Yuval, Marcou, Quentin, Sycheva, Anastasiia L., Komech, Ekaterina A., Nazarov, Vadim I., Britanova, Olga V., Chudakov, Dmitriy M., Mamedov, Ilgar Z., Lebedev, Yury B., Mora, Thierry, Walczak, Aleksandra M.
Publicado 2017

The Absence of Retroelement Activity Is Characteristic for Childhood Acute Leukemias and Adult Acute Lymphoblastic Leukemia

por Urazbakhtin, Shamil, Smirnova, Anastasia, Volakhava, Anastasiya, Zerkalenkova, Elena, Salyutina, Maria, Doubek, Michael, Jelinkova, Hana, Khudainazarova, Nelly, Volchkov, Egor, Belyaeva, Laima, Komech, Ekaterina, Pavlova, Sarka, Lebedev, Yuri, Plevova, Karla, Olshanskaya, Yulia, Komkov, Alexander, Mamedov, Ilgar
Publicado 2022

Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection

por Minervina, Anastasia A, Komech, Ekaterina A, Titov, Aleksei, Bensouda Koraichi, Meriem, Rosati, Elisa, Mamedov, Ilgar Z, Franke, Andre, Efimov, Grigory A, Chudakov, Dmitriy M, Mora, Thierry, Walczak, Aleksandra M, Lebedev, Yuri B, Pogorelyy, Mikhail V
Publicado 2021

Inactivated tick-borne encephalitis vaccine elicits several overlapping waves of T cell response

por Sycheva, Anastasiia L., Komech, Ekaterina A., Pogorelyy, Mikhail V., Minervina, Anastasia A., Urazbakhtin, Shamil Z., Salnikova, Maria A., Vorovitch, Mikhail F., Kopantzev, Eugene P., Zvyagin, Ivan V., Komkov, Alexander Y., Mamedov, Ilgar Z., Lebedev, Yuri B.
Publicado 2022

Precise tracking of vaccine-responding T cell clones reveals convergent and personalized response in identical twins

por Pogorelyy, Mikhail V., Minervina, Anastasia A., Touzel, Maximilian Puelma, Sycheva, Anastasiia L., Komech, Ekaterina A., Kovalenko, Elena I., Karganova, Galina G., Egorov, Evgeniy S., Komkov, Alexander Yu., Chudakov, Dmitriy M., Mamedov, Ilgar Z., Mora, Thierry, Walczak, Aleksandra M., Lebedev, Yuri B.
Publicado 2018

SeqURE – a new copy-capture based method for sequencing of unknown Retroposition events

por Komkov, Alexander Y., Urazbakhtin, Shamil Z., Saliutina, Maria V., Komech, Ekaterina A., Shelygin, Yuri A., Nugmanov, Gaiaz A., Shubin, Vitaliy P., Smirnova, Anastasia O., Bobrov, Mikhail Y., Tsukanov, Alexey S., Snezhkina, Anastasia V., Kudryavtseva, Anna V., Lebedev, Yuri B., Mamedov, Ilgar Z.
Publicado 2020

TCR repertoire profiling revealed antigen-driven CD8+ T cell clonal groups shared in synovial fluid of patients with spondyloarthritis

por Komech, Ekaterina A., Koltakova, Anastasia D., Barinova, Anna A., Minervina, Anastasia A., Salnikova, Maria A., Shmidt, Evgeniya I., Korotaeva, Tatiana V., Loginova, Elena Y., Erdes, Shandor F., Bogdanova, Ekaterina A., Shugay, Mikhail, Lukyanov, Sergey, Lebedev, Yury B., Zvyagin, Ivan V.
Publicado 2022

VDJdb: a curated database of T-cell receptor sequences with known antigen specificity

por Shugay, Mikhail, Bagaev, Dmitriy V, Zvyagin, Ivan V, Vroomans, Renske M, Crawford, Jeremy Chase, Dolton, Garry, Komech, Ekaterina A, Sycheva, Anastasiya L, Koneva, Anna E, Egorov, Evgeniy S, Eliseev, Alexey V, Van Dyk, Ewald, Dash, Pradyot, Attaf, Meriem, Rius, Cristina, Ladell, Kristin, McLaren, James E, Matthews, Katherine K, Clemens, E Bridie, Douek, Daniel C, Luciani, Fabio, van Baarle, Debbie, Kedzierska, Katherine, Kesmir, Can, Thomas, Paul G, Price, David A, Sewell, Andrew K, Chudakov, Dmitriy M
Publicado 2018