Complex Glycan Catabolism by the Human Gut Microbiota: The Bacteroidetes Sus-like Paradigm

por Martens, Eric C., Koropatkin, Nicole M., Smith, Thomas J., Gordon, Jeffrey I.
Publicado 2009

Superresolution Imaging Captures Carbohydrate Utilization Dynamics in Human Gut Symbionts

por Karunatilaka, Krishanthi S., Cameron, Elizabeth A., Martens, Eric C., Koropatkin, Nicole M., Biteen, Julie S.
Publicado 2014

The Glucoamylase Inhibitor Acarbose Has a Diet-Dependent and Reversible Effect on the Murine Gut Microbiome

por Baxter, Nielson T., Lesniak, Nicholas A., Sinani, Hamide, Schloss, Patrick D., Koropatkin, Nicole M.
Publicado 2019

Erratum for Baxter et al., “The Glucoamylase Inhibitor Acarbose Has a Diet-Dependent and Reversible Effect on the Murine Gut Microbiome”

por Baxter, Nielson T., Lesniak, Nicholas A., Sinani, Hamide, Schloss, Patrick D., Koropatkin, Nicole M.
Publicado 2019

Imaging living obligate anaerobic bacteria with bilin-binding fluorescent proteins

por Chia, Hannah E., Zuo, Tiancheng, Koropatkin, Nicole M., Marsh, E. Neil G., Biteen, Julie S.
Publicado 2020

Multifunctional Nutrient-Binding Proteins Adapt Human Symbiotic Bacteria for Glycan Competition in the Gut by Separately Promoting Enhanced Sensing and Catalysis

por Cameron, Elizabeth A., Kwiatkowski, Kurt J., Lee, Byung-Hoo, Hamaker, Bruce R., Koropatkin, Nicole M., Martens, Eric C.
Publicado 2014

A β‐mannan utilization locus in Bacteroides ovatus involves a GH36 α‐galactosidase active on galactomannans

por Reddy, Sumitha K., Bågenholm, Viktoria, Pudlo, Nicholas A., Bouraoui, Hanene, Koropatkin, Nicole M., Martens, Eric C., Stålbrand, Henrik
Publicado 2016

A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin

por Larsbrink, Johan, Zhu, Yongtao, Kharade, Sampada S., Kwiatkowski, Kurt J., Eijsink, Vincent G. H., Koropatkin, Nicole M., McBride, Mark J., Pope, Phillip B.
Publicado 2016

Multiple TonB Homologs are Important for Carbohydrate Utilization by Bacteroides thetaiotaomicron

por Pollet, Rebecca M, Foley, Matthew H, Kumar, Supriya Suresh, Elmore, Amanda, Jabara, Nisrine T, Venkatesh, Sameeksha, Pereira, Gabriel Vasconcelos, Martens, Eric C, Koropatkin, Nicole M
Publicado 2023

Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont

por Tauzin, Alexandra S., Kwiatkowski, Kurt J., Orlovsky, Nicole I., Smith, Christopher J., Creagh, A. Louise, Haynes, Charles A., Wawrzak, Zdzislaw, Brumer, Harry, Koropatkin, Nicole M.
Publicado 2016

Structural and Functional Analysis of a Multimodular Hyperthermostable Xylanase-Glucuronoyl Esterase from Caldicellulosiruptor kristjansonii

por Krska, Daniel, Mazurkewich, Scott, Brown, Haley A., Theibich, Yusuf, Poulsen, Jens-Christian N., Morris, Adeline L., Koropatkin, Nicole M., Lo Leggio, Leila, Larsbrink, Johan
Publicado 2021

Structural basis of Toxoplasma gondii perforin-like protein 1 membrane interaction and activity during egress

por Guerra, Alfredo J., Zhang, Ou, Bahr, Constance M. E., Huynh, My-Hang, DelProposto, James, Brown, William C., Wawrzak, Zdzislaw, Koropatkin, Nicole M., Carruthers, Vern B.
Publicado 2018

Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A β-MANNANASE

por Bågenholm, Viktoria, Reddy, Sumitha K., Bouraoui, Hanene, Morrill, Johan, Kulcinskaja, Evelina, Bahr, Constance M., Aurelius, Oskar, Rogers, Theresa, Xiao, Yao, Logan, Derek T., Martens, Eric C., Koropatkin, Nicole M., Stålbrand, Henrik
Publicado 2017

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

por Ze, Xiaolei, Ben David, Yonit, Laverde-Gomez, Jenny A., Dassa, Bareket, Sheridan, Paul O., Duncan, Sylvia H., Louis, Petra, Henrissat, Bernard, Juge, Nathalie, Koropatkin, Nicole M., Bayer, Edward A., Flint, Harry J.
Publicado 2015

Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome

por Cerqueira, Filipe M., Photenhauer, Amanda L., Doden, Heidi L., Brown, Aric N., Abdel-Hamid, Ahmed M., Moraïs, Sarah, Bayer, Edward A., Wawrzak, Zdzislaw, Cann, Isaac, Ridlon, Jason M., Hopkins, Jesse B., Koropatkin, Nicole M.
Publicado 2022

Degradation of complex arabinoxylans by human colonic Bacteroidetes

por Pereira, Gabriel V., Abdel-Hamid, Ahmed M., Dutta, Soumajit, D’Alessandro-Gabazza, Corina N., Wefers, Daniel, Farris, Jacob A., Bajaj, Shiv, Wawrzak, Zdzislaw, Atomi, Haruyuki, Mackie, Roderick I., Gabazza, Esteban C., Shukla, Diwakar, Koropatkin, Nicole M., Cann, Isaac
Publicado 2021

A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes

por Larsbrink, Johan, Rogers, Theresa E., Hemsworth, Glyn R., McKee, Lauren S., Tauzin, Alexandra S., Spadiut, Oliver, Klinter, Stefan, Pudlo, Nicholas A., Urs, Karthik, Koropatkin, Nicole M., Creagh, A. Louise, Haynes, Charles A., Kelly, Amelia G., Cederholm, Stefan Nilsson, Davies, Gideon J., Martens, Eric C., Brumer, Harry
Publicado 2014

Determining crystal structures through crowdsourcing and coursework

por Horowitz, Scott, Koepnick, Brian, Martin, Raoul, Tymieniecki, Agnes, Winburn, Amanda A., Cooper, Seth, Flatten, Jeff, Rogawski, David S., Koropatkin, Nicole M., Hailu, Tsinatkeab T., Jain, Neha, Koldewey, Philipp, Ahlstrom, Logan S., Chapman, Matthew R., Sikkema, Andrew P., Skiba, Meredith A., Maloney, Finn P., Beinlich, Felix R. M., Popović, Zoran, Baker, David, Khatib, Firas, Bardwell, James C. A.
Publicado 2016

Corrigendum: Determining crystal structures through crowdsourcing and coursework

por Horowitz, Scott, Koepnick, Brian, Martin, Raoul, Tymieniecki, Agnes, Winburn, Amanda A., Cooper, Seth, Flatten, Jeff, Rogawski, David S., Koropatkin, Nicole M., Hailu, Tsinatkeab T., Jain, Neha, Koldewey, Philipp, Ahlstrom, Logan S., Chapman, Matthew R., Sikkema, Andrew P., Skiba, Meredith A., Maloney, Finn P., Beinlich, Felix R. M., Popović, Zoran, Baker, David, Khatib, Firas, Bardwell, James C. A.
Publicado 2016