LS-NMF: A modified non-negative matrix factorization algorithm utilizing uncertainty estimates

por Wang, Guoli, Kossenkov, Andrew V, Ochs, Michael F
Publicado 2006

Bookmarking promoters in mitotic chromatin: poly(ADP-ribose)polymerase-1 as an epigenetic mark

por Lodhi, Niraj, Kossenkov, Andrew V., Tulin, Alexei V.
Publicado 2014

The peripheral immune response and lung cancer prognosis

por Showe, Michael K., Kossenkov, Andrew V., Showe, Louise C.
Publicado 2012

Processing of Alu small RNAs by DICER/ADAR1 complexes and their RNAi targets

por Shiromoto, Yusuke, Sakurai, Masayuki, Qu, Helen, Kossenkov, Andrew V., Nishikura, Kazuko
Publicado 2020

Human breast cancer associated fibroblasts exhibit subtype specific gene expression profiles

por Tchou, Julia, Kossenkov, Andrew V, Chang, Lisa, Satija, Celine, Herlyn, Meenhard, Showe, Louise C, Puré, Ellen
Publicado 2012

Immune response to influenza vaccination in the elderly is altered by chronic medication use

por Agarwal, Divyansh, Schmader, Kenneth E., Kossenkov, Andrew V., Doyle, Susan, Kurupati, Raj, Ertl, Hildegund C. J.
Publicado 2018

EBNA2 Drives Formation of New Chromosome Binding Sites and Target Genes for B-Cell Master Regulatory Transcription Factors RBP-jκ and EBF1

por Lu, Fang, Chen, Horng-Shen, Kossenkov, Andrew V., DeWispeleare, Karen, Won, Kyoung-Jae, Lieberman, Paul M.
Publicado 2016

Constitutive Gene Expression in Monocytes from Chronic HIV-1 Infection Overlaps with Acute Toll-Like Receptor Induced Monocyte Activation Profiles

por Gekonge, Bethsebah, Giri, Malavika S., Kossenkov, Andrew V., Nebozyhn, Michael, Yousef, Malik, Mounzer, Karam, Showe, Louise, Montaner, Luis J.
Publicado 2012

m(6)A independent genome-wide METTL3 and METTL14 redistribution drives senescence-associated secretory phenotype

por Liu, Pingyu, Li, Fuming, Lin, Jianhuang, Fukumoto, Takeshi, Nacarelli, Timothy, Hao, Xue, Kossenkov, Andrew V., Simon, M. Celeste, Zhang, Rugang
Publicado 2021

DAXX-ATRX regulation of p53 chromatin binding and DNA damage response

por Gulve, Nitish, Su, Chenhe, Deng, Zhong, Soldan, Samantha S., Vladimirova, Olga, Wickramasinghe, Jayamanna, Zheng, Hongwu, Kossenkov, Andrew V., Lieberman, Paul. M.
Publicado 2022

Intercellular hif1α reprograms mammary progenitors and myeloid immune evasion to drive high-risk breast lesions

por Bertolini, Irene, Perego, Michela, Nefedova, Yulia, Lin, Cindy, Milcarek, Andrew, Vogel, Peter, Ghosh, Jagadish C., Kossenkov, Andrew V., Altieri, Dario C.
Publicado 2023

Targeting Fatty Acid Reprogramming Suppresses CARM1-expressing Ovarian Cancer

por Lombardi, Simona, Goldman, Aaron R., Tang, Hsin-Yao, Kossenkov, Andrew V., Liu, Heng, Zhou, Wei, Herlyn, Meenhard, Lin, Jianhuang, Zhang, Rugang
Publicado 2023

Peripheral Immune Cell Gene Expression Predicts Survival of Patients with Non-Small Cell Lung Cancer

por Kossenkov, Andrew V., Dawany, Noor, Evans, Tracey L., Kucharczuk, John C., Albelda, Steven M., Showe, Louise C., Showe, Michael K., Vachani, Anil
Publicado 2012

Structural and functional analysis of the human POT1-TPP1 telomeric complex

por Rice, Cory, Shastrula, Prashanth Krishna, Kossenkov, Andrew V., Hills, Robert, Baird, Duncan M., Showe, Louise C., Doukov, Tzanko, Janicki, Susan, Skordalakes, Emmanuel
Publicado 2017

Small molecule perturbation of the CAND1-Cullin1-ubiquitin cycle stabilizes p53 and triggers Epstein-Barr virus reactivation

por Tikhmyanova, Nadezhda, Tutton, Steve, Martin, Kayla A., Lu, Fang, Kossenkov, Andrew V., Paparoidamis, Nicholas, Kenney, Shannon, Salvino, Joseph M., Lieberman, Paul M.
Publicado 2017

AKT PHOSPHORYLATION OF MITOCHONDRIAL LonP1 PROTEASE ENABLES OXIDATIVE METABOLISM AND ADVANCED TUMOR TRAITS

por Ghosh, Jagadish C., Seo, Jae Ho, Agarwal, Ekta, Wang, Yuan, Kossenkov, Andrew V., Tang, Hsin-Yao, Speicher, David W., Altieri, Dario C.
Publicado 2019

Evidence for Persistent Monocyte and Immune Dysregulation After Prolonged Viral Suppression Despite Normalization of Monocyte Subsets, sCD14 and sCD163 in HIV-Infected Individuals

por Yadav, Anjana, Kossenkov, Andrew V., Knecht, Vincent R., Showe, Louise C., Ratcliffe, Sarah J., Montaner, Luis J., Tebas, Pablo, Collman, Ronald G.
Publicado 2019

Identification of a 251 Gene Expression Signature That Can Accurately Detect M. tuberculosis in Patients with and without HIV Co-Infection

por Dawany, Noor, Showe, Louise C., Kossenkov, Andrew V., Chang, Celia, Ive, Prudence, Conradie, Francesca, Stevens, Wendy, Sanne, Ian, Azzoni, Livio, Montaner, Luis J.
Publicado 2014

Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α

por Basu, Subhasree, Gnanapradeepan, Keerthana, Barnoud, Thibaut, Kung, Che-Pei, Tavecchio, Michele, Scott, Jeremy, Watters, Andrea, Chen, Qing, Kossenkov, Andrew V., Murphy, Maureen E.
Publicado 2018

EBNA2 driven enhancer switching at the CIITA-DEXI locus suppresses HLA class II gene expression during EBV infection of B-lymphocytes

por Su, Chenhe, Lu, Fang, Soldan, Samantha S., Lamontagne, R. Jason, Tang, Hsin-Yao, Napoletani, Giorgia, Farrell, Paul J., Tempera, Italo, Kossenkov, Andrew V., Lieberman, Paul M.
Publicado 2021