Microarray Based Diagnosis Profits from Better Documentation of Gene Expression Signatures

por Kostka, Dennis, Spang, Rainer
Publicado 2008

scds: computational annotation of doublets in single-cell RNA sequencing data

por Bais, Abha S, Kostka, Dennis
Publicado 2019

Vaeda computationally annotates doublets in single-cell RNA sequencing data

por Schriever, Hannah, Kostka, Dennis
Publicado 2022

Modeling DNA methylation dynamics with approaches from phylogenetics

por Capra, John A., Kostka, Dennis
Publicado 2014

Random forest based similarity learning for single cell RNA sequencing data

por Pouyan, Maziyar Baran, Kostka, Dennis
Publicado 2018

Noncoding Sequences Near Duplicated Genes Evolve Rapidly

por Kostka, Dennis, Hahn, Matthew W., Pollard, Katherine S.
Publicado 2010

Developmental Loci Harbor Clusters of Accelerated Regions That Evolved Independently in Ape Lineages

por Kostka, Dennis, Holloway, Alisha K, Pollard, Katherine S
Publicado 2018

The Role of GC-Biased Gene Conversion in Shaping the Fastest Evolving Regions of the Human Genome

por Kostka, Dennis, Hubisz, Melissa J., Siepel, Adam, Pollard, Katherine S.
Publicado 2012

Large-scale inference of competing endogenous RNA networks with sparse partial correlation

por List, Markus, Dehghani Amirabad, Azim, Kostka, Dennis, Schulz, Marcel H
Publicado 2019

aenmd: Annotating escape from nonsense-mediated decay for transcripts with protein-truncating variants

por Klonowski, Jonathan, Liang, Qianqian, Coban-Akdemir, Zeynep, Lo, Cecilia, Kostka, Dennis
Publicado 2023

aenmd: annotating escape from nonsense-mediated decay for transcripts with protein-truncating variants

por Klonowski, Jonathan, Liang, Qianqian, Coban-Akdemir, Zeynep, Lo, Cecilia, Kostka, Dennis
Publicado 2023

Genome-wide enhancer annotations differ significantly in genomic distribution, evolution, and function

por Benton, Mary Lauren, Talipineni, Sai Charan, Kostka, Dennis, Capra, John A.
Publicado 2019

A Model-Based Analysis of GC-Biased Gene Conversion in the Human and Chimpanzee Genomes

por Capra, John A., Hubisz, Melissa J., Kostka, Dennis, Pollard, Katherine S., Siepel, Adam
Publicado 2013

Small non-coding RNA expression in mouse nephrogenic mesenchymal progenitors

por Phua, Yu Leng, Clugston, Andrew, Chen, Kevin Hong, Kostka, Dennis, Ho, Jacqueline
Publicado 2018

An intrinsically interpretable neural network architecture for sequence-to-function learning

por Balcı, Ali Tuğrul, Ebeid, Mark Maher, Benos, Panayiotis V, Kostka, Dennis, Chikina, Maria
Publicado 2023

An intrinsically interpretable neural network architecture for sequence to function learning

por Balcı, Ali Tuğrul, Ebeid, Mark Maher, Benos, Panayiotis V, Kostka, Dennis, Chikina, Maria
Publicado 2023

Single-cell RNA sequencing reveals differential cell cycle activity in key cell populations during nephrogenesis

por Bais, Abha S., Cerqueira, Débora M., Clugston, Andrew, Bodnar, Andrew J., Ho, Jacqueline, Kostka, Dennis
Publicado 2021

Computational profiling of hiPSC-derived heart organoids reveals chamber defects associated with NKX2-5 deficiency

por Feng, Wei, Schriever, Hannah, Jiang, Shan, Bais, Abha, Wu, Haodi, Kostka, Dennis, Li, Guang
Publicado 2022

Single-cell transcriptomic analysis identifies murine heart molecular features at embryonic and neonatal stages

por Feng, Wei, Bais, Abha, He, Haoting, Rios, Cassandra, Jiang, Shan, Xu, Juan, Chang, Cindy, Kostka, Dennis, Li, Guang
Publicado 2022

Integrating Diverse Datasets Improves Developmental Enhancer Prediction

por Erwin, Genevieve D., Oksenberg, Nir, Truty, Rebecca M., Kostka, Dennis, Murphy, Karl K., Ahituv, Nadav, Pollard, Katherine S., Capra, John A.
Publicado 2014