SCAFE: a software suite for analysis of transcribed cis-regulatory elements in single cells

حسب Moody, Jonathan, Kouno, Tsukasa, Chang, Jen-Chien, Ando, Yoshinari, Carninci, Piero, Shin, Jay W, Hon, Chung-Chau
منشور في 2022

Temporal dynamics and transcriptional control using single-cell gene expression analysis

حسب Kouno, Tsukasa, de Hoon, Michiel, Mar, Jessica C, Tomaru, Yasuhiro, Kawano, Mitsuoki, Carninci, Piero, Suzuki, Harukazu, Hayashizaki, Yoshihide, Shin, Jay W
منشور في 2013

Decoding Neuronal Diversification by Multiplexed Single-cell RNA-Seq

حسب Luginbühl, Joachim, Kouno, Tsukasa, Nakano, Rei, Chater, Thomas E., Sivaraman, Divya M., Kishima, Mami, Roudnicky, Filip, Carninci, Piero, Plessy, Charles, Shin, Jay W.
منشور في 2021

SCPortalen: human and mouse single-cell centric database

حسب Abugessaisa, Imad, Noguchi, Shuhei, Böttcher, Michael, Hasegawa, Akira, Kouno, Tsukasa, Kato, Sachi, Tada, Yuhki, Ura, Hiroki, Abe, Kuniya, Shin, Jay W, Plessy, Charles, Carninci, Piero, Kasukawa, Takeya
منشور في 2018

Microglia integration into human midbrain organoids leads to increased neuronal maturation and functionality

حسب Sabate‐Soler, Sonia, Nickels, Sarah Louise, Saraiva, Cláudia, Berger, Emanuel, Dubonyte, Ugne, Barmpa, Kyriaki, Lan, Yan Jun, Kouno, Tsukasa, Jarazo, Javier, Robertson, Graham, Sharif, Jafar, Koseki, Haruhiko, Thome, Christian, Shin, Jay W., Cowley, Sally A., Schwamborn, Jens C.
منشور في 2022

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T cells in supercentenarians

حسب Hashimoto, Kosuke, Kouno, Tsukasa, Ikawa, Tomokatsu, Hayatsu, Norihito, Miyajima, Yurina, Yabukami, Haruka, Terooatea, Tommy, Sasaki, Takashi, Suzuki, Takahiro, Valentine, Matthew, Pascarella, Giovanni, Okazaki, Yasushi, Suzuki, Harukazu, Shin, Jay W., Minoda, Aki, Taniuchi, Ichiro, Okano, Hideyuki, Arai, Yasumichi, Hirose, Nobuyoshi, Carninci, Piero
منشور في 2019

LETR1 is a lymphatic endothelial-specific lncRNA governing cell proliferation and migration through KLF4 and SEMA3C

حسب Ducoli, Luca, Agrawal, Saumya, Sibler, Eliane, Kouno, Tsukasa, Tacconi, Carlotta, Hon, Chung-Chao, Berger, Simone D., Müllhaupt, Daniela, He, Yuliang, Kim, Jihye, D’Addio, Marco, Dieterich, Lothar C., Carninci, Piero, de Hoon, Michiel J. L., Shin, Jay W., Detmar, Michael
منشور في 2021

Single-Cell RNA-Seq Reveals LRRC75A-Expressing Cell Population Involved in VEGF Secretion of Multipotent Mesenchymal Stromal/Stem Cells Under Ischemia

حسب Miura, Takumi, Kouno, Tsukasa, Takano, Megumi, Kuroda, Takuya, Yamamoto, Yumiko, Kusakawa, Shinji, Morioka, Masaki Suimye, Sugawara, Tohru, Hirai, Takamasa, Yasuda, Satoshi, Sawada, Rumi, Matsuyama, Satoko, Kawaji, Hideya, Kasukawa, Takeya, Itoh, Masayoshi, Matsuyama, Akifumi, Shin, Jay W, Umezawa, Akihiro, Kawai, Jun, Sato, Yoji
منشور في 2023

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

حسب Kouno, Tsukasa, Moody, Jonathan, Kwon, Andrew Tae-Jun, Shibayama, Youtaro, Kato, Sachi, Huang, Yi, Böttcher, Michael, Motakis, Efthymios, Mendez, Mickaël, Severin, Jessica, Luginbühl, Joachim, Abugessaisa, Imad, Hasegawa, Akira, Takizawa, Satoshi, Arakawa, Takahiro, Furuno, Masaaki, Ramalingam, Naveen, West, Jay, Suzuki, Harukazu, Kasukawa, Takeya, Lassmann, Timo, Hon, Chung-Chau, Arner, Erik, Carninci, Piero, Plessy, Charles, Shin, Jay W.
منشور في 2019

Brainstem Organoids From Human Pluripotent Stem Cells

حسب Eura, Nobuyuki, Matsui, Takeshi K., Luginbühl, Joachim, Matsubayashi, Masaya, Nanaura, Hitoki, Shiota, Tomo, Kinugawa, Kaoru, Iguchi, Naohiko, Kiriyama, Takao, Zheng, Canbin, Kouno, Tsukasa, Lan, Yan Jun, Kongpracha, Pornparn, Wiriyasermkul, Pattama, Sakaguchi, Yoshihiko M., Nagata, Riko, Komeda, Tomoya, Morikawa, Naritaka, Kitayoshi, Fumika, Jong, Miyong, Kobashigawa, Shinko, Nakanishi, Mari, Hasegawa, Masatoshi, Saito, Yasuhiko, Shiromizu, Takashi, Nishimura, Yuhei, Kasai, Takahiko, Takeda, Maiko, Kobayashi, Hiroshi, Inagaki, Yusuke, Tanaka, Yasuhito, Makinodan, Manabu, Kishimoto, Toshifumi, Kuniyasu, Hiroki, Nagamori, Shushi, Muotri, Alysson R., Shin, Jay W., Sugie, Kazuma, Mori, Eiichiro
منشور في 2020

Functional annotation of human long noncoding RNAs via molecular phenotyping

حسب Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Sánchez Martinez, Diego Fernando, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
منشور في 2020