Genetic dissection of complex traits using hierarchical biological knowledge

por Tanaka, Hidenori, Kreisberg, Jason F., Ideker, Trey
Publicado 2021

Endogenous factors enhance HIV infection of tissue naive CD4 T cells by stimulating high molecular mass APOBEC3G complex formation

por Kreisberg, Jason F., Yonemoto, Wes, Greene, Warner C.
Publicado 2006

Analysis of Matched Tumor and Normal Profiles Reveals Common Transcriptional and Epigenetic Signals Shared across Cancer Types

por Gross, Andrew M., Kreisberg, Jason F., Ideker, Trey
Publicado 2015

Structure-Based Analysis Reveals Cancer Missense Mutations Target Protein Interaction Interfaces

por Engin, H. Billur, Kreisberg, Jason F., Carter, Hannah
Publicado 2016

In Vitro Derived Dendritic Cells trans-Infect CD4 T Cells Primarily with Surface-Bound HIV-1 Virions

por Cavrois, Marielle, Neidleman, Jason, Kreisberg, Jason F, Greene, Warner C
Publicado 2007

Modulation of Caenorhabditis elegans infection sensitivity by the LIN-7 cell junction protein

por Sem, XiaoHui, Kreisberg, Jason F, Kawli, Trupti, Tan, Man-Wah, Rhen, Mikael, Tan, Patrick
Publicado 2012

Challenges in identifying cancer genes by analysis of exome sequencing data

por Hofree, Matan, Carter, Hannah, Kreisberg, Jason F., Bandyopadhyay, Sourav, Mischel, Paul S., Friend, Stephen, Ideker, Trey
Publicado 2016

Evidence for a common evolutionary rate in metazoan transcriptional networks

por Carvunis, Anne-Ruxandra, Wang, Tina, Skola, Dylan, Yu, Alice, Chen, Jonathan, Kreisberg, Jason F, Ideker, Trey
Publicado 2015

Translation of Genotype to Phenotype by a Hierarchy of Cell Subsystems

por Yu, Michael Ku, Kramer, Michael, Dutkowski, Janusz, Srivas, Rohith, Licon, Katherine, Kreisberg, Jason, Ng, Cherie T., Krogan, Nevan, Sharan, Roded, Ideker, Trey
Publicado 2016

Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment

por Wang, Tina, Tsui, Brian, Kreisberg, Jason F., Robertson, Neil A., Gross, Andrew M., Yu, Michael Ku, Carter, Hannah, Brown-Borg, Holly M., Adams, Peter D., Ideker, Trey
Publicado 2017

Multimodal perturbation analyses of cyclin-dependent kinases reveal a network of synthetic lethalities associated with cell-cycle regulation and transcriptional regulation

por Ford, Kyle, Munson, Brenton P., Fong, Samson H., Panwala, Rebecca, Chu, Wai Keung, Rainaldi, Joseph, Plongthongkum, Nongluk, Arunachalam, Vinayagam, Kostrowicki, Jarek, Meluzzi, Dario, Kreisberg, Jason F., Jensen-Pergakes, Kristen, VanArsdale, Todd, Paul, Thomas, Tamayo, Pablo, Zhang, Kun, Bienkowska, Jadwiga, Mali, Prashant, Ideker, Trey
Publicado 2023

A global transcriptional network connecting noncoding mutations to changes in tumor gene expression

por Zhang, Wei, Bojorquez-Gomez, Ana, Velez, Daniel Ortiz, Xu, Guorong, Sanchez, Kyle S., Shen, John Paul, Chen, Kevin, Licon, Katherine, Melton, Collin, Olson, Katrina M., Yu, Michael Ku, Huang, Justin K., Carter, Hannah, Farley, Emma K., Snyder, Michael, Fraley, Stephanie I., Kreisberg, Jason F., Ideker, Trey
Publicado 2018

The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei

por Ooi, Wen Fong, Ong, Catherine, Nandi, Tannistha, Kreisberg, Jason F., Chua, Hui Hoon, Sun, Guangwen, Chen, Yahua, Mueller, Claudia, Conejero, Laura, Eshaghi, Majid, Ang, Roy Moh Lik, Liu, Jianhua, Sobral, Bruno W., Korbsrisate, Sunee, Gan, Yunn Hwen, Titball, Richard W., Bancroft, Gregory J., Valade, Eric, Tan, Patrick
Publicado 2013

Combinatorial CRISPR-Cas9 screens for de novo mapping of genetic interactions

por Shen, John Paul, Zhao, Dongxin, Sasik, Roman, Luebeck, Jens, Birmingham, Amanda, Bojorquez-Gomez, Ana, Licon, Katherine, Klepper, Kristin, Pekin, Daniel, Beckett, Alex, Sanchez, Kyle, Thomas, Alex, Kuo, Chih-Chung, Du, Dan, Roguev, Assen, Lewis, Nathan E., Chang, Aaron N., Kreisberg, Jason F., Krogan, Nevan, Qi, Lei, Ideker, Trey, Mali, Prashant
Publicado 2017

A Genomic Survey of Positive Selection in Burkholderia pseudomallei Provides Insights into the Evolution of Accidental Virulence

por Nandi, Tannistha, Ong, Catherine, Singh, Arvind Pratap, Boddey, Justin, Atkins, Timothy, Sarkar-Tyson, Mitali, Essex-Lopresti, Angela E., Chua, Hui Hoon, Pearson, Talima, Kreisberg, Jason F., Nilsson, Christina, Ariyaratne, Pramila, Ronning, Catherine, Losada, Liliana, Ruan, Yijun, Sung, Wing-Kin, Woods, Donald, Titball, Richard W., Beacham, Ifor, Peak, Ian, Keim, Paul, Nierman, William C., Tan, Patrick
Publicado 2010

Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks

por Wright, Sarah N., Leger, Brittany S., Rosenthal, Sara Brin, Liu, Sophie N., Jia, Tongqiu, Chitre, Apurva S., Polesskaya, Oksana, Holl, Katie, Gao, Jianjun, Cheng, Riyan, Martinez, Angel Garcia, George, Anthony, Gileta, Alexander F., Han, Wenyan, Netzley, Alesa H., King, Christopher P., Lamparelli, Alexander, Martin, Connor, St. Pierre, Celine L., Wang, Tengfei, Bimschleger, Hannah, Richards, Jerry, Ishiwari, Keita, Chen, Hao, Flagel, Shelly B., Meyer, Paul, Robinson, Terry E., Woods, Leah C. Solberg, Kreisberg, Jason F., Ideker, Trey, Palmer, Abraham A.
Publicado 2023