Identification of novel stem cell markers using gap analysis of gene expression data

por Krzyzanowski, Paul M, Andrade-Navarro, Miguel A
Publicado 2007

Simple, multiplexed, PCR-based barcoding of DNA enables sensitive mutation detection in liquid biopsies using sequencing

por Ståhlberg, Anders, Krzyzanowski, Paul M., Jackson, Jennifer B., Egyud, Matthew, Stein, Lincoln, Godfrey, Tony E.
Publicado 2016

Integration of Expressed Sequence Tag Data Flanking Predicted RNA Secondary Structures Facilitates Novel Non-Coding RNA Discovery

por Krzyzanowski, Paul M., Price, Feodor D., Muro, Enrique M., Rudnicki, Michael A., Andrade-Navarro, Miguel A.
Publicado 2011

CaPSID: A bioinformatics platform for computational pathogen sequence identification in human genomes and transcriptomes

por Borozan, Ivan, Wilson, Shane, Blanchette, Paola, Laflamme, Philippe, Watt, Stuart N, Krzyzanowski, Paul M, Sircoulomb, Fabrice, Rottapel, Robert, Branton, Philip E, Ferretti, Vincent
Publicado 2012

Recent developments in StemBase: a tool to study gene expression in human and murine stem cells

por Sandie, Reatha, Palidwor, Gareth A, Huska, Matthew R, Porter, Christopher J, Krzyzanowski, Paul M, Muro, Enrique M, Perez-Iratxeta, Carolina, Andrade-Navarro, Miguel A
Publicado 2009

Combined EsophaCap cytology and MUC2 immunohistochemistry for screening of intestinal metaplasia, dysplasia and carcinoma

por Zhou, Zhongren, Kalatskaya, Irina, Russell, Donna, Marcon, Norman, Cirocco, Maria, Krzyzanowski, Paul M, Streutker, Cathy, Liang, Hua, Litle, Virginia R, Godfrey, Tony E, Stein, Lincoln
Publicado 2019

In-depth characterization of intratumoral heterogeneity in refractory B-cell non-Hodgkin lymphoma through the lens of a Research Autopsy Program

por Isaev, Keren, Liu, Ting, Bakhtiari, Mehran, Tong, Kit, Goswami, Rashmi, Lam, Bernard, Lungu, Ilinca, Krzyzanowski, Paul M., Oza, Amit, Dhani, Neesha, Prica, Anca, Crump, Michael, Kridel, Robert
Publicado 2022

Regional perturbation of gene transcription is associated with intrachromosomal rearrangements and gene fusion transcripts in high grade ovarian cancer

por Krzyzanowski, Paul M., Sircoulomb, Fabrice, Yousif, Fouad, Normand, Josee, La Rose, Jose, E. Francis, Kyle, Suarez, Fernando, Beck, Tim, McPherson, John D., Stein, Lincoln D., Rottapel, Robert K.
Publicado 2019

Plasma circulating tumor DNA as a potential tool for disease monitoring in head and neck cancer

por Egyud, Matthew, Sridhar, Praveen, Devaiah, Anand, Yamada, Emiko, Saunders, Stefanie, Ståhlberg, Anders, Filges, Stefan, Krzyzanowski, Paul M., Kalatskaya, Irina, Jiao, Wei, Stein, Lincoln D., Jalisi, Scharukh, Godfrey, Tony E.
Publicado 2018

Cryptic genomic lesions in adverse-risk acute myeloid leukemia identified by integrated whole genome and transcriptome sequencing

por Kim, Jaeseung C., Zuzarte, Philip C., Murphy, Tracy, Chan-Seng-Yue, Michelle, Brown, Andrew M. K., Krzyzanowski, Paul M., Smith, Adam C., Notta, Faiyaz, Minden, Mark D., McPherson, John D.
Publicado 2019

Downregulation of histone H2A and H2B pathways is associated with anthracycline sensitivity in breast cancer

por Braunstein, Marsela, Liao, Linda, Lyttle, Nicola, Lobo, Nazleen, Taylor, Karen J., Krzyzanowski, Paul M., Kalatskaya, Irina, Yao, Cindy Q., Stein, Lincoln D., Boutros, Paul C., Twelves, Christopher J., Marcellus, Richard, Bartlett, John M. S., Spears, Melanie
Publicado 2016

Prospective observational study and serosurvey of SARS-CoV-2 infection in asymptomatic healthcare workers at a Canadian tertiary care center

por Ferreira, Victor H., Chruscinski, Andrzej, Kulasingam, Vathany, Pugh, Trevor J., Dus, Tamara, Wouters, Brad, Oza, Amit, Ierullo, Matthew, Ku, Terrance, Majchrzak-Kita, Beata, Humar, Sonika T., Bahinskaya, Ilona, Pinzon, Natalia, Zhang, Jianhua, Heisler, Lawrence E., Krzyzanowski, Paul M., Lam, Bernard, Lungu, Ilinca M., Manase, Dorin, Pace, Krista M., Mashouri, Pouria, Brudno, Michael, Garrels, Michael, Mazzulli, Tony, Cybulsky, Myron, Humar, Atul, Kumar, Deepali
Publicado 2021

Prediction of acute myeloid leukaemia risk in healthy individuals

por Abelson, Sagi, Collord, Grace, Ng, Stanley W.K., Weissbrod, Omer, Cohen, Netta Mendelson, Niemeyer, Elisabeth, Barda, Noam, Zuzarte, Philip C., Heisler, Lawrence, Sundaravadanam, Yogi, Luben, Robert, Hayat, Shabina, Wang, Ting Ting, Zhao, Zhen, Cirlan, Iulia, Pugh, Trevor J., Soave, David, Ng, Karen, Latimer, Calli, Hardy, Claire, Raine, Keiran, Jones, David, Hoult, Diana, Britten, Abigail, McPherson, John D., Johansson, Mattias, Mbabaali, Faridah, Eagles, Jenna, Miller, Jessica, Pasternack, Danielle, Timms, Lee, Krzyzanowski, Paul, Awadalla, Phillip, Costa, Rui, Segal, Eran, Bratman, Scott V., Beer, Philip, Behjati, Sam, Martincorena, Inigo, Wang, Jean C.Y., Bowles, Kristian M., Quirós, J Ramón, Karakatsani, Anna, La Vecchia, Carlo, Trichopoulou, Antonia, Salamanca-Fernández, Elena, Huerta, José M., Barricarte, Aurelio, Travis, Ruth C., Tumino, Rosario, Masala, Giovanna, Boeing, Heiner, Panico, Salvatore, Kaaks, Rudolf, Krämer, Alwin, Sieri, Sabina, Riboli, Elio, Vineis, Paolo, Foll, Matthieu, McKay, James, Polidoro, Silvia, Sala, Núria, Khaw, Kay-Tee, Vermeulen, Roel, Campbell, Peter J, Papaemmanuil, Elli, Minden, Mark D, Tanay, Amos, Balicer, Ran D, Wareham, Nicholas J, Gerstung, Moritz, Dick, John E., Brennan, Paul, Vassiliou, George S., Shlush, Liran I.
Publicado 2018

Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival

por Zaidi, Syed H., Harrison, Tabitha A., Phipps, Amanda I., Steinfelder, Robert, Trinh, Quang M., Qu, Conghui, Banbury, Barbara L., Georgeson, Peter, Grasso, Catherine S., Giannakis, Marios, Adams, Jeremy B., Alwers, Elizabeth, Amitay, Efrat L., Barfield, Richard T., Berndt, Sonja I., Borozan, Ivan, Brenner, Hermann, Brezina, Stefanie, Buchanan, Daniel D., Cao, Yin, Chan, Andrew T., Chang-Claude, Jenny, Connolly, Charles M., Drew, David A., Farris, Alton Brad, Figueiredo, Jane C., French, Amy J., Fuchs, Charles S., Garraway, Levi A., Gruber, Steve, Guinter, Mark A., Hamilton, Stanley R., Harlid, Sophia, Heisler, Lawrence E., Hidaka, Akihisa, Hopper, John L., Huang, Wen-Yi, Huyghe, Jeroen R., Jenkins, Mark A., Krzyzanowski, Paul M., Lemire, Mathieu, Lin, Yi, Luo, Xuemei, Mardis, Elaine R., McPherson, John D., Miller, Jessica K., Moreno, Victor, Mu, Xinmeng Jasmine, Nishihara, Reiko, Papadopoulos, Nickolas, Pasternack, Danielle, Quist, Michael J., Rafikova, Adilya, Reid, Emma E. G., Shinbrot, Eve, Shirts, Brian H., Stein, Lincoln D., Teney, Cherie D., Timms, Lee, Um, Caroline Y., Van Guelpen, Bethany, Van Tassel, Megan, Wang, Xiaolong, Wheeler, David A., Yung, Christina K., Hsu, Li, Ogino, Shuji, Gsur, Andrea, Newcomb, Polly A., Gallinger, Steven, Hoffmeister, Michael, Campbell, Peter T., Thibodeau, Stephen N., Sun, Wei, Hudson, Thomas J., Peters, Ulrike
Publicado 2020