ADMIRE: analysis and visualization of differential methylation in genomic regions using the Infinium HumanMethylation450 Assay

por Preussner, Jens, Bayer, Julia, Kuenne, Carsten, Looso, Mario
Publicado 2015

LimiTT: link miRNAs to targets

por Bayer, Julia, Kuenne, Carsten, Preussner, Jens, Looso, Mario
Publicado 2016

MIRPIPE: quantification of microRNAs in niche model organisms

por Kuenne, Carsten, Preussner, Jens, Herzog, Mario, Braun, Thomas, Looso, Mario
Publicado 2014

TF-COMB – Discovering grammar of transcription factor binding sites

por Bentsen, Mette, Heger, Vanessa, Schultheis, Hendrik, Kuenne, Carsten, Looso, Mario
Publicado 2022

i2dash: Creation of Flexible, Interactive, and Web-based Dashboards for Visualization of Omics Data

por Ustjanzew, Arsenij, Preussner, Jens, Bentsen, Mette, Kuenne, Carsten, Looso, Mario
Publicado 2022

UROPA: a tool for Universal RObust Peak Annotation

por Kondili, Maria, Fust, Annika, Preussner, Jens, Kuenne, Carsten, Braun, Thomas, Looso, Mario
Publicado 2017

sRNAdb: A small non-coding RNA database for gram-positive bacteria

por Pischimarov, Jordan, Kuenne, Carsten, Billion, André, Hemberger, Jüergen, Cemič, Franz, Chakraborty, Trinad, Hain, Torsten
Publicado 2012

WIlsON: Web-based Interactive Omics VisualizatioN

por Schultheis, Hendrik, Kuenne, Carsten, Preussner, Jens, Wiegandt, Rene, Fust, Annika, Bentsen, Mette, Looso, Mario
Publicado 2019

Comparative Analysis of Plasmids in the Genus Listeria

por Kuenne, Carsten, Voget, Sonja, Pischimarov, Jordan, Oehm, Sebastian, Goesmann, Alexander, Daniel, Rolf, Hain, Torsten, Chakraborty, Trinad
Publicado 2010

Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431

por Fritzenwanker, Moritz, Kuenne, Carsten, Billion, Andre, Hain, Torsten, Zimmermann, Kurt, Goesmann, Alexander, Chakraborty, Trinad, Domann, Eugen
Publicado 2013

RNA-Seq analysis of isolated satellite cells in Prmt5 deficient mice

por Kuenne, Carsten, Guenther, Stefan, Looso, Mario, Zhang, Ting, Krueger, Marcus, Zhou, Yonggang, Braun, Thomas, Kim, Johnny
Publicado 2015

Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

por Kuenne, Carsten, Billion, André, Mraheil, Mobarak Abu, Strittmatter, Axel, Daniel, Rolf, Goesmann, Alexander, Barbuddhe, Sukhadeo, Hain, Torsten, Chakraborty, Trinad
Publicado 2013

multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets

por Bhagwat, Aditya M, Graumann, Johannes, Wiegandt, Rene, Bentsen, Mette, Welker, Jordan, Kuenne, Carsten, Preussner, Jens, Braun, Thomas, Looso, Mario
Publicado 2020

Genome-Wide Identification of Small RNAs in the Opportunistic Pathogen Enterococcus faecalis V583

por Shioya, Kouki, Michaux, Charlotte, Kuenne, Carsten, Hain, Torsten, Verneuil, Nicolas, Budin-Verneuil, Aurélie, Hartsch, Thomas, Hartke, Axel, Giard, Jean-Christophe
Publicado 2011

Identification of the orphan gene Prod 1 in basal and other salamander families

por Geng, Jie, Gates, Phillip B, Kumar, Anoop, Guenther, Stefan, Garza-Garcia, Acely, Kuenne, Carsten, Zhang, Peng, Looso, Mario, Brockes, Jeremy P
Publicado 2015

Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement

por Jia, Guangshuai, Preussner, Jens, Chen, Xi, Guenther, Stefan, Yuan, Xuejun, Yekelchyk, Michail, Kuenne, Carsten, Looso, Mario, Zhou, Yonggang, Teichmann, Sarah, Braun, Thomas
Publicado 2018

The flow responsive transcription factor Klf2 is required for myocardial wall integrity by modulating Fgf signaling

por Rasouli, Seyed Javad, El-Brolosy, Mohamed, Tsedeke, Ayele Taddese, Bensimon-Brito, Anabela, Ghanbari, Parisa, Maischein, Hans-Martin, Kuenne, Carsten, Stainier, Didier Y
Publicado 2018

The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages

por Mraheil, Mobarak A., Billion, André, Mohamed, Walid, Mukherjee, Krishnendu, Kuenne, Carsten, Pischimarov, Jordan, Krawitz, Christian, Retey, Julia, Hartsch, Thomas, Chakraborty, Trinad, Hain, Torsten
Publicado 2011

Aging Triggers H3K27 Trimethylation Hoarding in the Chromatin of Nothobranchius furzeri Skeletal Muscle

por Cencioni, Chiara, Heid, Johanna, Krepelova, Anna, Rasa, Seyed Mohammad Mahdi, Kuenne, Carsten, Guenther, Stefan, Baumgart, Mario, Cellerino, Alessandro, Neri, Francesco, Spallotta, Francesco, Gaetano, Carlo
Publicado 2019

ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation

por Bentsen, Mette, Goymann, Philipp, Schultheis, Hendrik, Klee, Kathrin, Petrova, Anastasiia, Wiegandt, René, Fust, Annika, Preussner, Jens, Kuenne, Carsten, Braun, Thomas, Kim, Johnny, Looso, Mario
Publicado 2020