Disease ontologies for knowledge graphs

por Kurbatova, Natalja, Swiers, Rowan
Publicado 2021

graph2tab, a library to convert experimental workflow graphs into tabular formats

por Brandizi, Marco, Kurbatova, Natalja, Sarkans, Ugis, Rocca-Serra, Philippe
Publicado 2012

IsoCleft Finder – a web-based tool for the detection and analysis of protein binding-site geometric and chemical similarities

por Kurbatova, Natalja, Chartier, Matthieu, Zylber, María Inés, Najmanovich, Rafael
Publicado 2013

PhenStat: A Tool Kit for Standardized Analysis of High Throughput Phenotypic Data

por Kurbatova, Natalja, Mason, Jeremy C., Morgan, Hugh, Meehan, Terrence F., Karp, Natasha A.
Publicado 2015

OntoCAT -- simple ontology search and integration in Java, R and REST/JavaScript

por Adamusiak, Tomasz, Burdett, Tony, Kurbatova, Natalja, Joeri van der Velde, K, Abeygunawardena, Niran, Antonakaki, Despoina, Kapushesky, Misha, Parkinson, Helen, Swertz, Morris A
Publicado 2011

A System for Information Management in BioMedical Studies—SIMBioMS

por Krestyaninova, Maria, Zarins, Andris, Viksna, Juris, Kurbatova, Natalja, Rucevskis, Peteris, Neogi, Sudeshna Guha, Gostev, Mike, Perheentupa, Teemu, Knuuttila, Juha, Barrett, Amy, Lappalainen, Ilkka, Rung, Johan, Podnieks, Karlis, Sarkans, Ugis, McCarthy, Mark I, Brazma, Alvis
Publicado 2009

ArrayExpress update—simplifying data submissions

por Kolesnikov, Nikolay, Hastings, Emma, Keays, Maria, Melnichuk, Olga, Tang, Y. Amy, Williams, Eleanor, Dylag, Miroslaw, Kurbatova, Natalja, Brandizi, Marco, Burdett, Tony, Megy, Karyn, Pilicheva, Ekaterina, Rustici, Gabriella, Tikhonov, Andrew, Parkinson, Helen, Petryszak, Robert, Sarkans, Ugis, Brazma, Alvis
Publicado 2014

ArrayExpress update—an archive of microarray and high-throughput sequencing-based functional genomics experiments

por Parkinson, Helen, Sarkans, Ugis, Kolesnikov, Nikolay, Abeygunawardena, Niran, Burdett, Tony, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Hastings, Emma, Holloway, Ele, Kurbatova, Natalja, Lukk, Margus, Malone, James, Mani, Roby, Pilicheva, Ekaterina, Rustici, Gabriella, Sharma, Anjan, Williams, Eleanor, Adamusiak, Tomasz, Brandizi, Marco, Sklyar, Nataliya, Brazma, Alvis
Publicado 2011

Gene Expression Atlas update—a value-added database of microarray and sequencing-based functional genomics experiments

por Kapushesky, Misha, Adamusiak, Tomasz, Burdett, Tony, Culhane, Aedin, Farne, Anna, Filippov, Alexey, Holloway, Ele, Klebanov, Andrey, Kryvych, Nataliya, Kurbatova, Natalja, Kurnosov, Pavel, Malone, James, Melnichuk, Olga, Petryszak, Robert, Pultsin, Nikolay, Rustici, Gabriella, Tikhonov, Andrew, Travillian, Ravensara S., Williams, Eleanor, Zorin, Andrey, Parkinson, Helen, Brazma, Alvis
Publicado 2012

ArrayExpress update—trends in database growth and links to data analysis tools

por Rustici, Gabriella, Kolesnikov, Nikolay, Brandizi, Marco, Burdett, Tony, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Hastings, Emma, Ison, Jon, Keays, Maria, Kurbatova, Natalja, Malone, James, Mani, Roby, Mupo, Annalisa, Pedro Pereira, Rui, Pilicheva, Ekaterina, Rung, Johan, Sharma, Anjan, Tang, Y. Amy, Ternent, Tobias, Tikhonov, Andrew, Welter, Danielle, Williams, Eleanor, Brazma, Alvis, Parkinson, Helen, Sarkans, Ugis
Publicado 2013

Urinary metabolic phenotyping for Alzheimer’s disease

por Kurbatova, Natalja, Garg, Manik, Whiley, Luke, Chekmeneva, Elena, Jiménez, Beatriz, Gómez-Romero, María, Pearce, Jake, Kimhofer, Torben, D’Hondt, Ellie, Soininen, Hilkka, Kłoszewska, Iwona, Mecocci, Patrizia, Tsolaki, Magda, Vellas, Bruno, Aarsland, Dag, Nevado-Holgado, Alejo, Liu, Benjamine, Snowden, Stuart, Proitsi, Petroula, Ashton, Nicholas J., Hye, Abdul, Legido-Quigley, Cristina, Lewis, Matthew R., Nicholson, Jeremy K., Holmes, Elaine, Brazma, Alvis, Lovestone, Simon
Publicado 2020

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data

por Koscielny, Gautier, Yaikhom, Gagarine, Iyer, Vivek, Meehan, Terrence F., Morgan, Hugh, Atienza-Herrero, Julian, Blake, Andrew, Chen, Chao-Kung, Easty, Richard, Di Fenza, Armida, Fiegel, Tanja, Grifiths, Mark, Horne, Alan, Karp, Natasha A., Kurbatova, Natalja, Mason, Jeremy C., Matthews, Peter, Oakley, Darren J., Qazi, Asfand, Regnart, Jack, Retha, Ahmad, Santos, Luis A., Sneddon, Duncan J., Warren, Jonathan, Westerberg, Henrik, Wilson, Robert J., Melvin, David G., Smedley, Damian, Brown, Steve D. M., Flicek, Paul, Skarnes, William C., Mallon, Ann-Marie, Parkinson, Helen
Publicado 2014

Applying the ARRIVE Guidelines to an In Vivo Database

por Karp, Natasha A., Meehan, Terry F., Morgan, Hugh, Mason, Jeremy C., Blake, Andrew, Kurbatova, Natalja, Smedley, Damian, Jacobsen, Julius, Mott, Richard F., Iyer, Vivek, Matthews, Peter, Melvin, David G., Wells, Sara, Flenniken, Ann M., Masuya, Hiroshi, Wakana, Shigeharu, White, Jacqueline K., Lloyd, K. C. Kent, Reynolds, Corey L., Paylor, Richard, West, David B., Svenson, Karen L., Chesler, Elissa J., de Angelis, Martin Hrabě, Tocchini-Valentini, Glauco P., Sorg, Tania, Herault, Yann, Parkinson, Helen, Mallon, Ann-Marie, Brown, Steve D. M.
Publicado 2015

An integrated genomic analysis of anaplastic meningioma identifies prognostic molecular signatures

por Collord, Grace, Tarpey, Patrick, Kurbatova, Natalja, Martincorena, Inigo, Moran, Sebastian, Castro, Manuel, Nagy, Tibor, Bignell, Graham, Maura, Francesco, Young, Matthew D., Berna, Jorge, Tubio, Jose M. C., McMurran, Chris E., Young, Adam M. H., Sanders, Mathijs, Noorani, Imran, Price, Stephen J., Watts, Colin, Leipnitz, Elke, Kirsch, Matthias, Schackert, Gabriele, Pearson, Danita, Devadass, Abel, Ram, Zvi, Collins, V. Peter, Allinson, Kieren, Jenkinson, Michael D., Zakaria, Rasheed, Syed, Khaja, Hanemann, C. Oliver, Dunn, Jemma, McDermott, Michael W., Kirollos, Ramez W., Vassiliou, George S., Esteller, Manel, Behjati, Sam, Brazma, Alvis, Santarius, Thomas, McDermott, Ultan
Publicado 2018

Prevalence of sexual dimorphism in mammalian phenotypic traits

por Karp, Natasha A., Mason, Jeremy, Beaudet, Arthur L., Benjamini, Yoav, Bower, Lynette, Braun, Robert E., Brown, Steve D.M., Chesler, Elissa J., Dickinson, Mary E., Flenniken, Ann M., Fuchs, Helmut, Angelis, Martin Hrabe de, Gao, Xiang, Guo, Shiying, Greenaway, Simon, Heller, Ruth, Herault, Yann, Justice, Monica J., Kurbatova, Natalja, Lelliott, Christopher J., Lloyd, K.C. Kent, Mallon, Ann-Marie, Mank, Judith E., Masuya, Hiroshi, McKerlie, Colin, Meehan, Terrence F., Mott, Richard F., Murray, Stephen A., Parkinson, Helen, Ramirez-Solis, Ramiro, Santos, Luis, Seavitt, John R., Smedley, Damian, Sorg, Tania, Speak, Anneliese O., Steel, Karen P., Svenson, Karen L., Wakana, Shigeharu, West, David, Wells, Sara, Westerberg, Henrik, Yaacoby, Shay, White, Jacqueline K.
Publicado 2017

Transcriptome and genome sequencing uncovers functional variation in humans

por Lappalainen, Tuuli, Sammeth, Michael, Friedländer, Marc R, ‘t Hoen, Peter AC, Monlong, Jean, Rivas, Manuel A, Gonzàlez-Porta, Mar, Kurbatova, Natalja, Griebel, Thasso, Ferreira, Pedro G, Barann, Matthias, Wieland, Thomas, Greger, Liliana, van Iterson, Maarten, Almlöf, Jonas, Ribeca, Paolo, Pulyakhina, Irina, Esser, Daniela, Giger, Thomas, Tikhonov, Andrew, Sultan, Marc, Bertier, Gabrielle, MacArthur, Daniel G, Lek, Monkol, Lizano, Esther, Buermans, Henk PJ, Padioleau, Ismael, Schwarzmayr, Thomas, Karlberg, Olof, Ongen, Halit, Kilpinen, Helena, Beltran, Sergi, Gut, Marta, Kahlem, Katja, Amstislavskiy, Vyacheslav, Stegle, Oliver, Pirinen, Matti, Montgomery, Stephen B, Donnelly, Peter, McCarthy, Mark I, Flicek, Paul, Strom, Tim M, Lehrach, Hans, Schreiber, Stefan, Sudbrak, Ralf, Carracedo, Ángel, Antonarakis, Stylianos E, Häsler, Robert, Syvänen, Ann-Christine, van Ommen, Gert-Jan, Brazma, Alvis, Meitinger, Thomas, Rosenstiel, Philip, Guigó, Roderic, Gut, Ivo G, Estivill, Xavier, Dermitzakis, Emmanouil T
Publicado 2013

A large scale hearing loss screen reveals an extensive unexplored genetic landscape for auditory dysfunction

por Bowl, Michael R., Simon, Michelle M., Ingham, Neil J., Greenaway, Simon, Santos, Luis, Cater, Heather, Taylor, Sarah, Mason, Jeremy, Kurbatova, Natalja, Pearson, Selina, Bower, Lynette R., Clary, Dave A., Meziane, Hamid, Reilly, Patrick, Minowa, Osamu, Kelsey, Lois, Tocchini-Valentini, Glauco P., Gao, Xiang, Bradley, Allan, Skarnes, William C., Moore, Mark, Beaudet, Arthur L., Justice, Monica J., Seavitt, John, Dickinson, Mary E., Wurst, Wolfgang, de Angelis, Martin Hrabe, Herault, Yann, Wakana, Shigeharu, Nutter, Lauryl M. J., Flenniken, Ann M., McKerlie, Colin, Murray, Stephen A., Svenson, Karen L., Braun, Robert E., West, David B., Lloyd, K. C. Kent, Adams, David J., White, Jacqui, Karp, Natasha, Flicek, Paul, Smedley, Damian, Meehan, Terrence F., Parkinson, Helen E., Teboul, Lydia M., Wells, Sara, Steel, Karen P., Mallon, Ann-Marie, Brown, Steve D. M.
Publicado 2017