Shrinkage improves estimation of microbial associations under different normalization methods

por Badri, Michelle, Kurtz, Zachary D, Bonneau, Richard, Müller, Christian L
Publicado 2020

Sparse and Compositionally Robust Inference of Microbial Ecological Networks

por Kurtz, Zachary D., Müller, Christian L., Miraldi, Emily R., Littman, Dan R., Blaser, Martin J., Bonneau, Richard A.
Publicado 2015

Fungi stabilize connectivity in the lung and skin microbial ecosystems

por Tipton, Laura, Müller, Christian L., Kurtz, Zachary D., Huang, Laurence, Kleerup, Eric, Morris, Alison, Bonneau, Richard, Ghedin, Elodie
Publicado 2018

Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

por Liu, Menghan, Koh, Hyunwook, Kurtz, Zachary D., Battaglia, Thomas, PeBenito, Amanda, Li, Huilin, Nazzal, Lama, Blaser, Martin J.
Publicado 2017

Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet

por Mahana, Douglas, Trent, Chad M., Kurtz, Zachary D., Bokulich, Nicholas A., Battaglia, Thomas, Chung, Jennifer, Müller, Christian L., Li, Huilin, Bonneau, Richard A., Blaser, Martin J.
Publicado 2016

Lung microbiome and host immune tone in subjects with idiopathic pulmonary fibrosis treated with inhaled interferon-γ

por Wang, Jing, Lesko, Melissa, Badri, Michelle H., Kapoor, Bianca C., Wu, Benjamin G., Li, Yonghua, Smaldone, Gerald C., Bonneau, Richard, Kurtz, Zachary D., Condos, Rany, Segal, Leopoldo N.
Publicado 2017

Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota

por Lee, Soo Ching, Tang, Mei San, Lim, Yvonne A. L., Choy, Seow Huey, Kurtz, Zachary D., Cox, Laura M., Gundra, Uma Mahesh, Cho, Ilseung, Bonneau, Richard, Blaser, Martin J., Chua, Kek Heng, Loke, P'ng
Publicado 2014

A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity

por Ruiz, Victoria E., Battaglia, Thomas, Kurtz, Zachary D., Bijnens, Luc, Ou, Amy, Engstrand, Isak, Zheng, Xuhui, Iizumi, Tadasu, Mullins, Briana J., Müller, Christian L., Cadwell, Ken, Bonneau, Richard, Perez-Perez, Guillermo I., Blaser, Martin J.
Publicado 2017

Correction: Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota

por Lee, Soo Ching, Tang, Mei San, Lim, Yvonne A. L., Choy, Seow Huey, Kurtz, Zachary D., Cox, Laura M., Gundra, Uma Mahesh, Cho, Ilseung, Bonneau, Richard, Blaser, Martin J., Chua, Kek Heng, Loke, P’ng
Publicado 2021