An era of single-cell genomics consortia

por Ando, Yoshinari, Kwon, Andrew Tae-Jun, Shin, Jay W.
Publicado 2020

Validation of Skeletal Muscle cis-Regulatory Module Predictions Reveals Nucleotide Composition Bias in Functional Enhancers

por Kwon, Andrew T., Chou, Alice Yi, Arenillas, David J., Wasserman, Wyeth W.
Publicado 2011

oPOSSUM-3: Advanced Analysis of Regulatory Motif Over-Representation Across Genes or ChIP-Seq Datasets

por Kwon, Andrew T., Arenillas, David J., Hunt, Rebecca Worsley, Wasserman, Wyeth W.
Publicado 2012

oPOSSUM: integrated tools for analysis of regulatory motif over-representation

por Ho Sui, Shannan J., Fulton, Debra L., Arenillas, David J., Kwon, Andrew T., Wasserman, Wyeth W.
Publicado 2007

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

por Portales-Casamar, Elodie, Thongjuea, Supat, Kwon, Andrew T., Arenillas, David, Zhao, Xiaobei, Valen, Eivind, Yusuf, Dimas, Lenhard, Boris, Wasserman, Wyeth W., Sandelin, Albin
Publicado 2010

Gut microbial carbohydrate metabolism contributes to insulin resistance

por Takeuchi, Tadashi, Kubota, Tetsuya, Nakanishi, Yumiko, Tsugawa, Hiroshi, Suda, Wataru, Kwon, Andrew Tae-Jun, Yazaki, Junshi, Ikeda, Kazutaka, Nemoto, Shino, Mochizuki, Yoshiki, Kitami, Toshimori, Yugi, Katsuyuki, Mizuno, Yoshiko, Yamamichi, Nobutake, Yamazaki, Tsutomu, Takamoto, Iseki, Kubota, Naoto, Kadowaki, Takashi, Arner, Erik, Carninci, Piero, Ohara, Osamu, Arita, Makoto, Hattori, Masahira, Koyasu, Shigeo, Ohno, Hiroshi
Publicado 2023

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

por Kouno, Tsukasa, Moody, Jonathan, Kwon, Andrew Tae-Jun, Shibayama, Youtaro, Kato, Sachi, Huang, Yi, Böttcher, Michael, Motakis, Efthymios, Mendez, Mickaël, Severin, Jessica, Luginbühl, Joachim, Abugessaisa, Imad, Hasegawa, Akira, Takizawa, Satoshi, Arakawa, Takahiro, Furuno, Masaaki, Ramalingam, Naveen, West, Jay, Suzuki, Harukazu, Kasukawa, Takeya, Lassmann, Timo, Hon, Chung-Chau, Arner, Erik, Carninci, Piero, Plessy, Charles, Shin, Jay W.
Publicado 2019

Functional annotation of human long noncoding RNAs via molecular phenotyping

por Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Sánchez Martinez, Diego Fernando, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
Publicado 2020