Proteomic and Physiological Responses of Kineococcus radiotolerans to Copper

por Bagwell, Christopher E., Hixson, Kim K., Milliken, Charles E., Lopez-Ferrer, Daniel, Weitz, Karl K.
Publicado 2010

Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics

por Furtwängler, Benjamin, Üresin, Nil, Motamedchaboki, Khatereh, Huguet, Romain, Lopez-Ferrer, Daniel, Zabrouskov, Vlad, Porse, Bo T., Schoof, Erwin M.
Publicado 2022

Ultrasensitive single-cell proteomics workflow identifies >1000 protein groups per mammalian cell

por Cong, Yongzheng, Motamedchaboki, Khatereh, Misal, Santosh A., Liang, Yiran, Guise, Amanda J., Truong, Thy, Huguet, Romain, Plowey, Edward D., Zhu, Ying, Lopez-Ferrer, Daniel, Kelly, Ryan T.
Publicado 2020

Dynamic metabolic reprogramming in dendritic cells: An early response to influenza infection that is essential for effector function

por Rezinciuc, Svetlana, Bezavada, Lavanya, Bahadoran, Azadeh, Duan, Susu, Wang, Ruoning, Lopez-Ferrer, Daniel, Finkelstein, David, McGargill, Maureen A., Green, Douglas R., Pasa-Tolic, Ljiljana, Smallwood, Heather S.
Publicado 2020

Characterization of Macaque Pulmonary Fluid Proteome during Monkeypox Infection: DYNAMICS OF HOST RESPONSE

por Brown, Joseph N., Estep, Ryan D., Lopez-Ferrer, Daniel, Brewer, Heather M., Clauss, Theresa R., Manes, Nathan P., O'Connor, Megan, Li, Helen, Adkins, Joshua N., Wong, Scott W., Smith, Richard D.
Publicado 2010

Pressurized Pepsin Digestion in Proteomics: AN AUTOMATABLE ALTERNATIVE TO TRYPSIN FOR INTEGRATED TOP-DOWN BOTTOM-UP PROTEOMICS*

por López-Ferrer, Daniel, Petritis, Konstantinos, Robinson, Errol W., Hixson, Kim K., Tian, Zhixin, Lee, Jung Hwa, Lee, Sang-Won, Tolić, Nikola, Weitz, Karl K., Belov, Mikhail E., Smith, Richard D., Paša-Tolić, Ljiljana
Publicado 2011

SPINDLY mediates O-fucosylation of hundreds of proteins and sugar-dependent growth in Arabidopsis

por Bi, Yang, Shrestha, Ruben, Zhang, Zhenzhen, Hsu, Chuan-Chih, Reyes, Andres V, Karunadasa, Sumudu, Baker, Peter R, Maynard, Jason C, Liu, Yang, Hakimi, Amirmansoor, Lopez-Ferrer, Daniel, Hassan, Tahmid, Chalkley, Robert J, Xu, Shou-Ling, Wang, Zhi-Yong
Publicado 2023

Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models

por Lewis, Nathan E, Hixson, Kim K, Conrad, Tom M, Lerman, Joshua A, Charusanti, Pep, Polpitiya, Ashoka D, Adkins, Joshua N, Schramm, Gunnar, Purvine, Samuel O, Lopez-Ferrer, Daniel, Weitz, Karl K, Eils, Roland, König, Rainer, Smith, Richard D, Palsson, Bernhard Ø
Publicado 2010

Charge-based interactions through peptide position 4 drive diversity of antigen presentation by human leukocyte antigen class I molecules

por Jackson, Kyle R, Antunes, Dinler A, Talukder, Amjad H, Maleki, Ariana R, Amagai, Kano, Salmon, Avery, Katailiha, Arjun S, Chiu, Yulun, Fasoulis, Romanos, Rigo, Maurício Menegatti, Abella, Jayvee R, Melendez, Brenda D, Li, Fenge, Sun, Yimo, Sonnemann, Heather M, Belousov, Vladislav, Frenkel, Felix, Justesen, Sune, Makaju, Aman, Liu, Yang, Horn, David, Lopez-Ferrer, Daniel, Huhmer, Andreas F, Hwu, Patrick, Roszik, Jason, Hawke, David, Kavraki, Lydia E, Lizée, Gregory
Publicado 2022