DivCom: A Tool for Systematic Partition of Groups of Microbial Profiles Into Intrinsic Subclusters and Distance-Based Subgroup Comparisons

por Intze , Evangelia, Lagkouvardos , Ilias
Publicado 2022

Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons

por Lagkouvardos, Ilias, Fischer, Sandra, Kumar, Neeraj, Clavel, Thomas
Publicado 2017

Cronos: A Machine Learning Pipeline for Description and Predictive Modeling of Microbial Communities Over Time

por Litos, Aristeidis, Intze, Evangelia, Pavlidis, Pavlos, Lagkouvardos, Ilias
Publicado 2022

Taxonomy Informed Clustering, an Optimized Method for Purer and More Informative Clusters in Diversity Analysis and Microbiome Profiling

por Kioukis, Antonios, Pourjam, Mohsen, Neuhaus, Klaus, Lagkouvardos, Ilias
Publicado 2022

Large-Scale Integration of Amplicon Data Reveals Massive Diversity within Saprospirales, Mostly Originating from Saline Environments

por Mourgela, Rafaila Nikola, Kioukis, Antonios, Pourjam, Mohsen, Lagkouvardos, Ilias
Publicado 2023

The giant ciliate Zoothamnium niveum and its thiotrophic epibiont Candidatus Thiobios zoothamnicoli: a model system to study interspecies cooperation

por Bright, Monika, Espada-Hinojosa, Salvador, Lagkouvardos, Ilias, Volland, Jean-Marie
Publicado 2014

Life in an unusual intracellular niche: a bacterial symbiont infecting the nucleus of amoebae

por Schulz, Frederik, Lagkouvardos, Ilias, Wascher, Florian, Aistleitner, Karin, Kostanjšek, Rok, Horn, Matthias
Publicado 2014

MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes

por Kumar, Neeraj, Hitch, Thomas C. A., Haller, Dirk, Lagkouvardos, Ilias, Clavel, Thomas
Publicado 2021

An Insight into Goat Cheese: The Tales of Artisanal and Industrial Gidotyri Microbiota

por Nelli, Aikaterini, Venardou, Brigkita, Skoufos, Ioannis, Voidarou, Chrysoula (Chrysa), Lagkouvardos, Ilias, Tzora, Athina
Publicado 2023

IMNGS: A comprehensive open resource of processed 16S rRNA microbial profiles for ecology and diversity studies

por Lagkouvardos, Ilias, Joseph, Divya, Kapfhammer, Martin, Giritli, Sabahattin, Horn, Matthias, Haller, Dirk, Clavel, Thomas
Publicado 2016

Draft Genome Sequence of Paenibacillus polymyxa DSM 292, a Gram-Positive, Spore-Forming Soil Bacterium with High Biotechnological Potential

por Heinze, Simon, Lagkouvardos, Ilias, Liebl, Wolfgang, Schwarz, Wolfgang H., Kornberger, Petra, Zverlov, Vladimir V.
Publicado 2020

Alteration of Intestinal Microbiome of Clostridioides difficile-Infected Hamsters during the Treatment with Specific Cow Antibodies

por Heidebrecht, Hans-Jürgen, Lagkouvardos, Ilias, Reitmeier, Sandra, Hengst, Claudia, Kulozik, Ulrich, Pfaffl, Michael W.
Publicado 2021

Persistent Dysbiosis, Parasite Rise and Growth Impairment in Aquacultured European Seabass after Oxytetracycline Treatment

por Rigas, Dimitris, Grivas, Nikos, Nelli, Aikaterini, Gouva, Evangelia, Skoufos, Ioannis, Kormas, Konstantinos, Tzora, Athina, Lagkouvardos, Ilias
Publicado 2023

Massive Expansion of Ubiquitination-Related Gene Families within the Chlamydiae

por Domman, Daryl, Collingro, Astrid, Lagkouvardos, Ilias, Gehre, Lena, Weinmaier, Thomas, Rattei, Thomas, Subtil, Agathe, Horn, Matthias
Publicado 2014

Mining gut microbiome oligopeptides by functional metaproteome display

por Zantow, Jonas, Just, Sarah, Lagkouvardos, Ilias, Kisling, Sigrid, Dübel, Stefan, Lepage, Patricia, Clavel, Thomas, Hust, Michael
Publicado 2016

Draft Genome of Scalindua rubra, Obtained from the Interface Above the Discovery Deep Brine in the Red Sea, Sheds Light on Potential Salt Adaptation Strategies in Anammox Bacteria

por Speth, Daan R., Lagkouvardos, Ilias, Wang, Yong, Qian, Pei-Yuan, Dutilh, Bas E., Jetten, Mike S. M.
Publicado 2017

The “Crosstalk” between Microbiota and Metabolomic Profile of Kefalograviera Cheese after the Innovative Feeding Strategy of Dairy Sheep by Omega-3 Fatty Acids

por Tzora, Athina, Nelli, Aikaterini, Kritikou, Anastasia S., Katsarou, Danai, Giannenas, Ilias, Lagkouvardos, Ilias, Thomaidis, Nikolaos S., Skoufos, Ioannis
Publicado 2022

Processing Matters in Nutrient-Matched Laboratory Diets for Mice—Microbiome

por Wenderlein, Jasmin, Böswald, Linda F., Ulrich, Sebastian, Kienzle, Ellen, Neuhaus, Klaus, Lagkouvardos, Ilias, Zenner, Christian, Straubinger, Reinhard K.
Publicado 2021

A Novel Primer Mixture for GH48 Genes: Quantification and Identification of Truly Cellulolytic Bacteria in Biogas Fermenters

por Rettenmaier, Regina, Lo, Yat Kei, Schmidt, Larissa, Munk, Bernhard, Lagkouvardos, Ilias, Neuhaus, Klaus, Schwarz, Wolfgang, Liebl, Wolfgang, Zverlov, Vladimir
Publicado 2020

The Development of the Bacterial Community of Brown Trout (Salmo trutta) during Ontogeny

por Keiz, Katharina, Ulrich, Sebastian, Wenderlein, Jasmin, Keferloher, Patrick, Wiesinger, Anna, Neuhaus, Klaus, Lagkouvardos, Ilias, Wedekind, Helmut, Straubinger, Reinhard K.
Publicado 2023