High-Resolution Single-Cell DNA Methylation Measurements Reveal Epigenetically Distinct Hematopoietic Stem Cell Subpopulations

por Hui, Tony, Cao, Qi, Wegrzyn-Woltosz, Joanna, O'Neill, Kieran, Hammond, Colin A., Knapp, David J.H.F., Laks, Emma, Moksa, Michelle, Aparicio, Samuel, Eaves, Connie J., Karsan, Aly, Hirst, Martin
Publicado 2018

clonealign: statistical integration of independent single-cell RNA and DNA sequencing data from human cancers

por Campbell, Kieran R., Steif, Adi, Laks, Emma, Zahn, Hans, Lai, Daniel, McPherson, Andrew, Farahani, Hossein, Kabeer, Farhia, O’Flanagan, Ciara, Biele, Justina, Brimhall, Jazmine, Wang, Beixi, Walters, Pascale, Consortium, IMAXT, Bouchard-Côté, Alexandre, Aparicio, Samuel, Shah, Sohrab P.
Publicado 2019

Epiclomal: Probabilistic clustering of sparse single-cell DNA methylation data

por P. E. de Souza, Camila, Andronescu, Mirela, Masud, Tehmina, Kabeer, Farhia, Biele, Justina, Laks, Emma, Lai, Daniel, Ye, Patricia, Brimhall, Jazmine, Wang, Beixi, Su, Edmund, Hui, Tony, Cao, Qi, Wong, Marcus, Moksa, Michelle, Moore, Richard A., Hirst, Martin, Aparicio, Samuel, Shah, Sohrab P.
Publicado 2020

TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data

por Ha, Gavin, Roth, Andrew, Khattra, Jaswinder, Ho, Julie, Yap, Damian, Prentice, Leah M., Melnyk, Nataliya, McPherson, Andrew, Bashashati, Ali, Laks, Emma, Biele, Justina, Ding, Jiarui, Le, Alan, Rosner, Jamie, Shumansky, Karey, Marra, Marco A., Gilks, C. Blake, Huntsman, David G., McAlpine, Jessica N., Aparicio, Samuel, Shah, Sohrab P.
Publicado 2014

Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing

por Laks, Emma, McPherson, Andrew, Zahn, Hans, Lai, Daniel, Steif, Adi, Brimhall, Jazmine, Biele, Justina, Wang, Beixi, Masud, Tehmina, Ting, Jerome, Grewal, Diljot, Nielsen, Cydney, Leung, Samantha, Bojilova, Viktoria, Smith, Maia, Golovko, Oleg, Poon, Steven, Eirew, Peter, Kabeer, Farhia, Ruiz de Algara, Teresa, Lee, So Ra, Taghiyar, M. Jafar, Huebner, Curtis, Ngo, Jessica, Chan, Tim, Vatrt-Watts, Spencer, Walters, Pascale, Abrar, Nafis, Chan, Sophia, Wiens, Matt, Martin, Lauren, Scott, R. Wilder, Underhill, T. Michael, Chavez, Elizabeth, Steidl, Christian, Da Costa, Daniel, Ma, Yussanne, Coope, Robin J.N., Corbett, Richard, Pleasance, Stephen, Moore, Richard, Mungall, Andrew J., Mar, Colin, Cafferty, Fergus, Gelmon, Karen, Chia, Stephen, Marra, Marco A., Hansen, Carl, Shah, Sohrab P., Aparicio, Samuel
Publicado 2019