Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis

por Viehweger, Adrian, Krautwurst, Sebastian, Lamkiewicz, Kevin, Madhugiri, Ramakanth, Ziebuhr, John, Hölzer, Martin, Marz, Manja
Publicado 2019

Virus Bioinformatics

por Pappas, Nikolaos, Roux, Simon, Hölzer, Martin, Lamkiewicz, Kevin, Mock, Florian, Marz, Manja, Dutilh, Bas E.
Publicado 2021

Genomic analysis of 61 Chlamydia psittaci strains reveals extensive divergence associated with host preference

por Sachse, Konrad, Hölzer, Martin, Vorimore, Fabien, Barf, Lisa-Marie, Sachse, Carsten, Laroucau, Karine, Marz, Manja, Lamkiewicz, Kevin
Publicado 2023

Structural and functional conservation of cis-acting RNA elements in coronavirus 5'-terminal genome regions

por Madhugiri, Ramakanth, Karl, Nadja, Petersen, Daniel, Lamkiewicz, Kevin, Fricke, Markus, Wend, Ulrike, Scheuer, Robina, Marz, Manja, Ziebuhr, John
Publicado 2018

Structure and Hierarchy of Influenza Virus Models Revealed by Reaction Network Analysis

por Peter, Stephan, Hölzer, Martin, Lamkiewicz, Kevin, di Fenizio, Pietro Speroni, Al Hwaeer, Hassan, Marz, Manja, Schuster, Stefan, Dittrich, Peter, Ibrahim, Bashar
Publicado 2019

Comparative Genome Analysis of 33 Chlamydia Strains Reveals Characteristic Features of Chlamydia Psittaci and Closely Related Species

por Hölzer, Martin, Barf, Lisa-Marie, Lamkiewicz, Kevin, Vorimore, Fabien, Lataretu, Marie, Favaroni, Alison, Schnee, Christiane, Laroucau, Karine, Marz, Manja, Sachse, Konrad
Publicado 2020

Sequential disruption of SPLASH-identified vRNA–vRNA interactions challenges their role in influenza A virus genome packaging

por Jakob, Celia, Lovate, Gabriel L, Desirò, Daniel, Gießler, Lara, Smyth, Redmond P, Marquet, Roland, Lamkiewicz, Kevin, Marz, Manja, Schwemmle, Martin, Bolte, Hardin
Publicado 2023

A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes

por Mostajo, Nelly F, Lataretu, Marie, Krautwurst, Sebastian, Mock, Florian, Desirò, Daniel, Lamkiewicz, Kevin, Collatz, Maximilian, Schoen, Andreas, Weber, Friedemann, Marz, Manja, Hölzer, Martin
Publicado 2019

Rfam 14: expanded coverage of metagenomic, viral and microRNA families

por Kalvari, Ioanna, Nawrocki, Eric P, Ontiveros-Palacios, Nancy, Argasinska, Joanna, Lamkiewicz, Kevin, Marz, Manja, Griffiths-Jones, Sam, Toffano-Nioche, Claire, Gautheret, Daniel, Weinberg, Zasha, Rivas, Elena, Eddy, Sean R, Finn, Robert D, Bateman, Alex, Petrov, Anton I
Publicado 2020

The International Virus Bioinformatics Meeting 2020

por Hufsky, Franziska, Beerenwinkel, Niko, Meyer, Irmtraud M., Roux, Simon, Cook, Georgia May, Kinsella, Cormac M., Lamkiewicz, Kevin, Marquet, Mike, Nieuwenhuijse, David F., Olendraite, Ingrida, Paraskevopoulou, Sofia, Young, Francesca, Dijkman, Ronald, Ibrahim, Bashar, Kelly, Jenna, Le Mercier, Philippe, Marz, Manja, Ramette, Alban, Thiel, Volker
Publicado 2020

The Third Annual Meeting of the European Virus Bioinformatics Center

por Hufsky, Franziska, Ibrahim, Bashar, Modha, Sejal, Clokie, Martha R. J., Deinhardt-Emmer, Stefanie, Dutilh, Bas E., Lycett, Samantha, Simmonds, Peter, Thiel, Volker, Abroi, Aare, Adriaenssens, Evelien M., Escalera-Zamudio, Marina, Kelly, Jenna Nicole, Lamkiewicz, Kevin, Lu, Lu, Susat, Julian, Sicheritz, Thomas, Robertson, David L., Marz, Manja
Publicado 2019

The International Virus Bioinformatics Meeting 2023

por Hufsky, Franziska, Abecasis, Ana B., Babaian, Artem, Beck, Sebastian, Brierley, Liam, Dellicour, Simon, Eggeling, Christian, Elena, Santiago F., Gieraths, Udo, Ha, Anh D., Harvey, Will, Jones, Terry C., Lamkiewicz, Kevin, Lovate, Gabriel L., Lücking, Dominik, Machyna, Martin, Nishimura, Luca, Nocke, Maximilian K., Renard, Bernard Y., Sakaguchi, Shoichi, Sakellaridi, Lygeri, Spangenberg, Jannes, Tarradas-Alemany, Maria, Triebel, Sandra, Vakulenko, Yulia, Wijesekara, Rajitha Yasas, González-Candelas, Fernando, Krautwurst, Sarah, Pérez-Cataluña, Alba, Randazzo, Walter, Sánchez, Gloria, Marz, Manja
Publicado 2023

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

por Hufsky, Franziska, Lamkiewicz, Kevin, Almeida, Alexandre, Aouacheria, Abdel, Arighi, Cecilia, Bateman, Alex, Baumbach, Jan, Beerenwinkel, Niko, Brandt, Christian, Cacciabue, Marco, Chuguransky, Sara, Drechsel, Oliver, Finn, Robert D, Fritz, Adrian, Fuchs, Stephan, Hattab, Georges, Hauschild, Anne-Christin, Heider, Dominik, Hoffmann, Marie, Hölzer, Martin, Hoops, Stefan, Kaderali, Lars, Kalvari, Ioanna, von Kleist, Max, Kmiecinski, Renó, Kühnert, Denise, Lasso, Gorka, Libin, Pieter, List, Markus, Löchel, Hannah F, Martin, Maria J, Martin, Roman, Matschinske, Julian, McHardy, Alice C, Mendes, Pedro, Mistry, Jaina, Navratil, Vincent, Nawrocki, Eric P, O’Toole, Áine Niamh, Ontiveros-Palacios, Nancy, Petrov, Anton I, Rangel-Pineros, Guillermo, Redaschi, Nicole, Reimering, Susanne, Reinert, Knut, Reyes, Alejandro, Richardson, Lorna, Robertson, David L, Sadegh, Sepideh, Singer, Joshua B, Theys, Kristof, Upton, Chris, Welzel, Marius, Williams, Lowri, Marz, Manja
Publicado 2020