Host-Microbe Metagenomics: a Lens To Refocus Our Perspective on Infectious and Inflammatory Diseases

por Kalantar, Katrina L., Langelier, Charles R.
Publicado 2021

Metagenomic Sequencing in the ICU for Precision Diagnosis of Critical Infectious Illnesses

por Neyton, Lucile P. A., Langelier, Charles R., Calfee, Carolyn S.
Publicado 2023

Prevalence of type-1 interferon autoantibodies in adults with non-COVID-19 acute respiratory failure

por Ghale, Rajani, Spottiswoode, Natasha, Anderson, Mark S., Mitchell, Anthea, Wang, Grace, Calfee, Carolyn S., DeRisi, Joseph L., Langelier, Charles R.
Publicado 2022

Aerosolized nicotine from e-cigarettes alters gene expression, increases lung protein permeability, and impairs viral clearance in murine influenza infection

por Maishan, Mazharul, Sarma, Aartik, Chun, Lauren F., Caldera, Saharai, Fang, Xiaohui, Abbott, Jason, Christenson, Stephanie A., Langelier, Charles R., Calfee, Carolyn S., Gotts, Jeffrey E., Matthay, Michael A.
Publicado 2023

In host evolution of beta lactam resistance during active treatment for Pseudomonas aeruginosa bacteremia

por Spottiswoode, Natasha, Hao, Samantha, Sanchez-Guerrero, Estella, Detweiler, Angela M., Mekonen, Honey, Neff, Norma, Macmillan, Henriette, Schwartz, Brian S., Engel, Joanne, DeRisi, Joseph L., Miller, Steven A., Langelier, Charles R.
Publicado 2023

Clinical and biological heterogeneity of multisystem inflammatory syndrome in adults following SARS-CoV-2 infection: a case series

por Barth, Kaia E., Spottiswoode, Natasha, Hurabielle, Charlotte, Subbaraj, Lakshmi, Calfee, Carolyn S., Matthay, Michael A., French, Sarah, Connolly, Andrew, Hewitt, Stephen M., Vannella, Kevin M., Barnett, Christopher, Langelier, Charles R., Patterson, Sarah
Publicado 2023

The antibiotic resistance reservoir of the lung microbiome expands with age

por Chu, Victoria T., Tsitsiklis, Alexandra, Mick, Eran, Ambroggio, Lilliam, Kalantar, Katrina L., Glascock, Abigail, Osborne, Christina M., Wagner, Brandie D., Matthay, Michael A., DeRisi, Joseph L., Calfee, Carolyn S., Mourani, Peter M., Langelier, Charles R.
Publicado 2023

Posttransfusion Sepsis Attributable to Bacterial Contamination in Platelet Collection Set Manufacturing Facility, United States

por Kracalik, Ian, Kent, Alyssa G., Villa, Carlos H., Gable, Paige, Annambhotla, Pallavi, McAllister, Gillian, Yokoe, Deborah, Langelier, Charles R., Oakeson, Kelly, Noble-Wang, Judith, Illoh, Orieji, Halpin, Alison Laufer, Eder, Anne F., Basavaraju, Sridhar V.
Publicado 2023

A 2-Gene Host Signature for Improved Accuracy of COVID-19 Diagnosis Agnostic to Viral Variants

por Albright, Jack, Mick, Eran, Sanchez-Guerrero, Estella, Kamm, Jack, Mitchell, Anthea, Detweiler, Angela M., Neff, Norma, Tsitsiklis, Alexandra, Hayakawa Serpa, Paula, Ratnasiri, Kalani, Havlir, Diane, Kistler, Amy, DeRisi, Joseph L., Pisco, Angela Oliveira, Langelier, Charles R.
Publicado 2022

Distinct pulmonary and systemic effects of dexamethasone in severe COVID-19

por Neyton, Lucile P. A., Patel, Ravi K., Sarma, Aartik, Willmore, Andrew, Haller, Sidney C., Kangelaris, Kirsten N., Eckalbar, Walter L., Erle, David J., Krummel, Matthew F., Hendrickson, Carolyn M., Woodruff, Prescott G., Langelier, Charles R., Calfee, Carolyn S., Fragiadakis, Gabriela K.
Publicado 2023

A conserved immune trajectory of recovery in hospitalized COVID-19 patients

por Burnett, Cassandra E., Okholm, Trine Line Hauge, Tenvooren, Iliana, Marquez, Diana M., Tamaki, Stanley, Sandoval, Priscila Munoz, Calfee, Carolyn S., Hendrickson, Carolyn M., Kangelaris, Kirsten N., Langelier, Charles R., Krummel, Matthew F., Woodruff, Prescott G., Erle, David J., Ansel, K. Mark, Spitzer, Matthew H.
Publicado 2022

COVID-19–associated Lung Microvascular Endotheliopathy: A “From the Bench” Perspective

por Joffre, Jérémie, Rodriguez, Lauren, Matthay, Zachary A., Lloyd, Elliot, Fields, Alexander T., Bainton, Roland J., Kurien, Philip, Sil, Anita, Calfee, Carolyn S., Woodruff, Prescott G., Erle, David J., Hendrickson, Carolyn, Krummel, Matthew F., Langelier, Charles R., Matthay, Michael A., Kornblith, Lucy Z., Hellman, Judith
Publicado 2022

Mass cytometry reveals a conserved immune trajectory of recovery in hospitalized COVID-19 patients

por Burnett, Cassandra E., Okholm, Trine Line Hauge, Tenvooren, Iliana, Marquez, Diana M., Tamaki, Stanley, Munoz Sandoval, Priscila, Willmore, Andrew, Hendrickson, Carolyn M., Kangelaris, Kirsten N., Langelier, Charles R., Krummel, Matthew F., Woodruff, Prescott G., Calfee, Carolyn S., Erle, David J., Ansel, K. Mark, Spitzer, Matthew H.
Publicado 2022

Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections

por Serpa, Paula Hayakawa, Deng, Xianding, Abdelghany, Mazin, Crawford, Emily, Malcolm, Katherine, Caldera, Saharai, Fung, Monica, McGeever, Aaron, Kalantar, Katrina L., Lyden, Amy, Ghale, Rajani, Deiss, Thomas, Neff, Norma, Miller, Steven A., Doernberg, Sarah B., Chiu, Charles Y., DeRisi, Joseph L., Calfee, Carolyn S., Langelier, Charles R.
Publicado 2022

Immediate myeloid depot for SARS-CoV-2 in the human lung

por Magnen, Mélia, You, Ran, Rao, Arjun A., Davis, Ryan T., Rodriguez, Lauren, Simoneau, Camille R., Hysenaj, Lisiena, Hu, Kenneth H., Love, Christina, Woodruff, Prescott G., Erle, David J., Hendrickson, Carolyn M., Calfee, Carolyn S., Matthay, Michael A., Roose, Jeroen P., Sil, Anita, Ott, Melanie, Langelier, Charles R., Krummel, Matthew F., Looney, Mark R.
Publicado 2022

Immediate myeloid depot for SARS-CoV-2 in the human lung

por Magnen, Mélia, You, Ran, Rao, Arjun A., Davis, Ryan T., Rodriguez, Lauren, Simoneau, Camille R., Hysenaj, Lisiena, Hu, Kenneth H., Love, Christina, Woodruff, Prescott G., Erle, David J., Hendrickson, Carolyn M., Calfee, Carolyn S., Matthay, Michael A., Roose, Jeroen P., Sil, Anita, Ott, Melanie, Langelier, Charles R., Krummel, Matthew F., Looney, Mark R.
Publicado 2022

Upper airway gene expression reveals a more robust innate and adaptive immune response to SARS-CoV-2 in children compared with older adults

por Mick, Eran, Tsitsiklis, Alexandra, Spottiswoode, Natasha, Caldera, Saharai, Serpa, Paula Hayakawa, Detweiler, Angela M., Neff, Norma, Pisco, Angela Oliveira, Li, Lucy M., Retallack, Hanna, Ratnasiri, Kalani, Williamson, Kayla M., Soesanto, Victoria, Simões, Eric A. F., Kistler, Amy, Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2021

Integrated host/microbe metagenomics enables accurate lower respiratory tract infection diagnosis in critically ill children

por Mick, Eran, Tsitsiklis, Alexandra, Kamm, Jack, Kalantar, Katrina L., Caldera, Saharai, Lyden, Amy, Tan, Michelle, Detweiler, Angela M., Neff, Norma, Osborne, Christina M., Williamson, Kayla M., Soesanto, Victoria, Leroue, Matthew, Maddux, Aline B., Simões, Eric A.F., Carpenter, Todd C., Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2023

Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19

por Wick, Katherine D., Leligdowicz, Aleksandra, Willmore, Andrew, Carrillo, Sidney A., Ghale, Rajani, Jauregui, Alejandra, Chak, Suzanna S., Nguyen, Viet, Lee, Deanna, Jones, Chayse, Dewar, Robin, Lane, H. Clifford, Kangelaris, Kirsten N., Hendrickson, Carolyn M., Liu, Kathleen D., Sinha, Pratik, Erle, David J., Langelier, Charles R., Krummell, Matthew F., Woodruff, Prescott G., Calfee, Carolyn S., Matthay, Michael A.
Publicado 2022

Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children

por Mick, Eran, Tsitsiklis, Alexandra, Spottiswoode, Natasha, Caldera, Saharai, Serpa, Paula Hayakawa, Detweiler, Angela M., Neff, Norma, Pisco, Angela Oliveira, Li, Lucy M., Retallack, Hanna, Ratnasiri, Kalani, Williamson, Kayla M., Soesanto, Victoria, Simões, Eric A. F., Smith, Christiana, Abuogi, Lisa, Kistler, Amy, Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2022