PIGNON: a protein–protein interaction-guided functional enrichment analysis for quantitative proteomics

por Nadeau, Rachel, Byvsheva, Anastasiia, Lavallée-Adam, Mathieu
Publicado 2021

Functional 5′ UTR motif discovery with LESMoN: Local Enrichment of Sequence Motifs in biological Networks

por Lavallée-Adam, Mathieu, Cloutier, Philippe, Coulombe, Benoit, Blanchette, Mathieu
Publicado 2017

A Newly Uncovered Group of Distantly Related Lysine Methyltransferases Preferentially Interact with Molecular Chaperones to Regulate Their Activity

por Cloutier, Philippe, Lavallée-Adam, Mathieu, Faubert, Denis, Blanchette, Mathieu, Coulombe, Benoit
Publicado 2013

PSEA-Quant: A Protein Set Enrichment Analysis on Label-Free and Label-Based Protein Quantification Data

por Lavallée-Adam, Mathieu, Rauniyar, Navin, McClatchy, Daniel B., Yates, John R.
Publicado 2014

Increased proteomic complexity in Drosophila hybrids during development

por Bamberger, Casimir, Martínez-Bartolomé, Salvador, Montgomery, Miranda, Lavallée-Adam, Mathieu, Yates, John R.
Publicado 2018

Nuclear import of RNA polymerase II is coupled with nucleocytoplasmic shuttling of the RNA polymerase II-associated protein 2

por Forget, Diane, Lacombe, Andrée-Anne, Cloutier, Philippe, Lavallée-Adam, Mathieu, Blanchette, Mathieu, Coulombe, Benoit
Publicado 2013

Sheathless Capillary Electrophoresis-Tandem Mass Spectrometry for Top-Down Characterization of Pyrococcus furiosus Proteins on a Proteome Scale

por Han, Xuemei, Wang, Yueju, Aslanian, Aaron, Bern, Marshall, Lavallée-Adam, Mathieu, Yates, John R.
Publicado 2014

Ddp1 Cooperates with Ppx1 to Counter a Stress Response Initiated by Nonvacuolar Polyphosphate

por McCarthy, Liam, Abramchuk, Iryna, Wafy, Gamal, Denoncourt, Alix, Lavallée-Adam, Mathieu, Downey, Michael
Publicado 2022

Proteomics analysis reveals a role for E. coli polyphosphate kinase in membrane structure and polymyxin resistance during starvation

por Baijal, Kanchi, Abramchuk, Iryna, Herrera, Carmen M., Stephen Trent, M., Lavallée-Adam, Mathieu, Downey, Michael
Publicado 2023

Quantitative analysis of global protein stability rates in tissues

por McClatchy, Daniel B., Martínez-Bartolomé, Salvador, Gao, Yu, Lavallée-Adam, Mathieu, Yates, John R.
Publicado 2020

Proteomics characterization of mitochondrial‐derived vesicles under oxidative stress

por Vasam, Goutham, Nadeau, Rachel, Cadete, Virgilio J. J., Lavallée‐Adam, Mathieu, Menzies, Keir J., Burelle, Yan
Publicado 2021

A functional ecological network based on metaproteomics responses of individual gut microbiomes to resistant starches

por Li, Leyuan, Ryan, James, Ning, Zhibin, Zhang, Xu, Mayne, Janice, Lavallée-Adam, Mathieu, Stintzi, Alain, Figeys, Daniel
Publicado 2020

ΔF508 CFTR interactome remodeling promotes rescue of Cystic Fibrosis

por Pankow, Sandra, Bamberger, Casimir, Calzolari, Diego, Martínez-Bartolomé, Salvador, Lavallée-Adam, Mathieu, Balch, William E., Yates, John R.
Publicado 2015

MetaProClust-MS1: an MS1 Profiling Approach for Large-Scale Microbiome Screening

por Simopoulos, Caitlin M. A., Ning, Zhibin, Li, Leyuan, Khamis, Mona M., Zhang, Xu, Lavallée-Adam, Mathieu, Figeys, Daniel
Publicado 2022

Curation of the Mammalian Palmitoylome Indicates a Pivotal Role for Palmitoylation in Diseases and Disorders of the Nervous System and Cancers

por Sanders, Shaun S., Martin, Dale D. O., Butland, Stefanie L., Lavallée-Adam, Mathieu, Calzolari, Diego, Kay, Chris, Yates, John R., Hayden, Michael R.
Publicado 2015

The Protein Interaction Network of the Human Transcription Machinery Reveals a Role for the Conserved GTPase RPAP4/GPN1 and Microtubule Assembly in Nuclear Import and Biogenesis of...

por Forget, Diane, Lacombe, Andrée-Anne, Cloutier, Philippe, Al-Khoury, Racha, Bouchard, Annie, Lavallée-Adam, Mathieu, Faubert, Denis, Jeronimo, Célia, Blanchette, Mathieu, Coulombe, Benoit
Publicado 2010

Proteomic analyses reveal misregulation of LIN28 expression and delayed timing of glial differentiation in human iPS cells with MECP2 loss-of-function

por Kim, Jean J., Savas, Jeffrey N., Miller, Meghan T., Hu, Xindao, Carromeu, Cassiano, Lavallée-Adam, Mathieu, Freitas, Beatriz C. G., Muotri, Alysson R., Yates, John R., Ghosh, Anirvan
Publicado 2019

Identification of novel lipid droplet factors that regulate lipophagy and cholesterol efflux in macrophage foam cells

por Robichaud, Sabrina, Fairman, Garrett, Vijithakumar, Viyashini, Mak, Esther, Cook, David P., Pelletier, Alexander R., Huard, Sylvain, Vanderhyden, Barbara C., Figeys, Daniel, Lavallée-Adam, Mathieu, Baetz, Kristin, Ouimet, Mireille
Publicado 2021

A complex of C9ORF72 and p62 uses arginine methylation to eliminate stress granules by autophagy

por Chitiprolu, Maneka, Jagow, Chantal, Tremblay, Veronique, Bondy-Chorney, Emma, Paris, Geneviève, Savard, Alexandre, Palidwor, Gareth, Barry, Francesca A., Zinman, Lorne, Keith, Julia, Rogaeva, Ekaterina, Robertson, Janice, Lavallée-Adam, Mathieu, Woulfe, John, Couture, Jean-François, Côté, Jocelyn, Gibbings, Derrick
Publicado 2018

Recessive mutations in POLR1C cause a leukodystrophy by impairing biogenesis of RNA polymerase III

por Thiffault, Isabelle, Wolf, Nicole I., Forget, Diane, Guerrero, Kether, Tran, Luan T., Choquet, Karine, Lavallée-Adam, Mathieu, Poitras, Christian, Brais, Bernard, Yoon, Grace, Sztriha, Laszlo, Webster, Richard I., Timmann, Dagmar, van de Warrenburg, Bart P., Seeger, Jürgen, Zimmermann, Alíz, Máté, Adrienn, Goizet, Cyril, Fung, Eva, van der Knaap, Marjo S., Fribourg, Sébastien, Vanderver, Adeline, Simons, Cas, Taft, Ryan J., Yates III, John R., Coulombe, Benoit, Bernard, Geneviève
Publicado 2015