De novo construction of a “Gene-space” for diploid plant genome rich in repetitive sequences by an iterative Process of Extraction and Assembly of NGS reads (iPEA protocol) with li...

por Aluome, Christelle, Aubert, Grégoire, Alves Carvalho, Susete, Le Paslier, Marie-Christine, Burstin, Judith, Brunel, Dominique
Publicado 2016

Patterns of Genetic Structure and Linkage Disequilibrium in a Large Collection of Pea Germplasm

por Siol, Mathieu, Jacquin, Françoise, Chabert-Martinello, Marianne, Smýkal, Petr, Le Paslier, Marie-Christine, Aubert, Grégoire, Burstin, Judith
Publicado 2017

NLGenomeSweeper: A Tool for Genome-Wide NBS-LRR Resistance Gene Identification

por Toda, Nicholas, Rustenholz, Camille, Baud, Agnès, Le Paslier, Marie-Christine, Amselem, Joelle, Merdinoglu, Didier, Faivre-Rampant, Patricia
Publicado 2020

Quick and efficient approach to develop genomic resources in orphan species: Application in Lavandula angustifolia

por Fopa Fomeju, Berline, Brunel, Dominique, Bérard, Aurélie, Rivoal, Jean-Baptiste, Gallois, Philippe, Le Paslier, Marie-Christine, Bouverat-Bernier, Jean-Pierre
Publicado 2020

Genotyping of DNA pools identifies untapped landraces and genomic regions to develop next‐generation varieties

por Arca, Mariangela, Gouesnard, Brigitte, Mary‐Huard, Tristan, Le Paslier, Marie‐Christine, Bauland, Cyril, Combes, Valérie, Madur, Delphine, Charcosset, Alain, Nicolas, Stéphane D.
Publicado 2023

Genome-Wide Association Mapping in Tomato (Solanum lycopersicum) Is Possible Using Genome Admixture of Solanum lycopersicum var. cerasiforme

por Ranc, Nicolas, Muños, Stephane, Xu, Jiaxin, Le Paslier, Marie-Christine, Chauveau, Aurélie, Bounon, Rémi, Rolland, Sophie, Bouchet, Jean-Paul, Brunel, Dominique, Causse, Mathilde
Publicado 2012

Genome Sequences of Populus tremula Chloroplast and Mitochondrion: Implications for Holistic Poplar Breeding

por Kersten, Birgit, Faivre Rampant, Patricia, Mader, Malte, Le Paslier, Marie-Christine, Bounon, Rémi, Berard, Aurélie, Vettori, Cristina, Schroeder, Hilke, Leplé, Jean-Charles, Fladung, Matthias
Publicado 2016

Thirteen New Plastid Genomes from Mixotrophic and Autotrophic Species Provide Insights into Heterotrophy Evolution in Neottieae Orchids

por Lallemand, Félix, Logacheva, Maria, Le Clainche, Isabelle, Bérard, Aurélie, Zheleznaia, Ekaterina, May, Michał, Jakalski, Marcin, Delannoy, Étienne, Le Paslier, Marie-Christine, Selosse, Marc-André
Publicado 2019

Whole genome resequencing in tomato reveals variation associated with introgression and breeding events

por Causse, Mathilde, Desplat, Nelly, Pascual, Laura, Le Paslier, Marie-Christine, Sauvage, Christopher, Bauchet, Guillaume, Bérard, Aurélie, Bounon, Rémi, Tchoumakov, Maria, Brunel, Dominique, Bouchet, Jean-Paul
Publicado 2013

Characterization of the Poplar Pan-Genome by Genome-Wide Identification of Structural Variation

por Pinosio, Sara, Giacomello, Stefania, Faivre-Rampant, Patricia, Taylor, Gail, Jorge, Veronique, Le Paslier, Marie Christine, Zaina, Giusi, Bastien, Catherine, Cattonaro, Federica, Marroni, Fabio, Morgante, Michele
Publicado 2016

Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection

por Canaguier, Aurélie, Guilbaud, Romane, Denis, Erwan, Magdelenat, Ghislaine, Belser, Caroline, Istace, Benjamin, Cruaud, Corinne, Wincker, Patrick, Le Paslier, Marie-Christine, Faivre-Rampant, Patricia, Barbe, Valérie
Publicado 2022

Building a cluster of NLR genes conferring resistance to pests and pathogens: the story of the Vat gene cluster in cucurbits

por Chovelon, Véronique, Feriche-Linares, Rafael, Barreau, Guillaume, Chadoeuf, Joël, Callot, Caroline, Gautier, Véronique, Le Paslier, Marie-Christine, Berad, Aurélie, Faivre-Rampant, Patricia, Lagnel, Jacques, Boissot, Nathalie
Publicado 2021

Transcriptomic analysis of the interaction between Helianthus annuus and its obligate parasite Plasmopara halstedii shows single nucleotide polymorphisms in CRN sequences

por As-sadi, Falah, Carrere, Sébastien, Gascuel, Quentin, Hourlier, Thibaut, Rengel, David, Le Paslier, Marie-Christine, Bordat, Amandine, Boniface, Marie-Claude, Brunel, Dominique, Gouzy, Jérôme, Godiard, Laurence, Vincourt, Patrick
Publicado 2011

Genomic Prediction in Pea: Effect of Marker Density and Training Population Size and Composition on Prediction Accuracy

por Tayeh, Nadim, Klein, Anthony, Le Paslier, Marie-Christine, Jacquin, Françoise, Houtin, Hervé, Rond, Céline, Chabert-Martinello, Marianne, Magnin-Robert, Jean-Bernard, Marget, Pascal, Aubert, Grégoire, Burstin, Judith
Publicado 2015

Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants

por Darracq, Aude, Vitte, Clémentine, Nicolas, Stéphane, Duarte, Jorge, Pichon, Jean-Philippe, Mary-Huard, Tristan, Chevalier, Céline, Bérard, Aurélie, Le Paslier, Marie-Christine, Rogowsky, Peter, Charcosset, Alain, Joets, Johann
Publicado 2018

Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies

por Nicolas, Stéphane D., Péros, Jean-Pierre, Lacombe, Thierry, Launay, Amandine, Le Paslier, Marie-Christine, Bérard, Aurélie, Mangin, Brigitte, Valière, Sophie, Martins, Frédéric, Le Cunff, Loïc, Laucou, Valérie, Bacilieri, Roberto, Dereeper, Alexis, Chatelet, Philippe, This, Patrice, Doligez, Agnès
Publicado 2016

Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions

por Houel, Cléa, Bounon, Rémi, Chaïb, Jamila, Guichard, Cécile, Péros, Jean-Pierre, Bacilieri, Roberto, Dereeper, Alexis, Canaguier, Aurélie, Lacombe, Thierry, N'Diaye, Amidou, Le Paslier, Marie-Christine, Vernerey, Marie-Stéphanie, Coriton, Olivier, Brunel, Dominique, This, Patrice, Torregrosa, Laurent, Adam-Blondon, Anne-Françoise
Publicado 2010

High throughput SNP discovery and genotyping in hexaploid wheat

por Rimbert, Hélène, Darrier, Benoît, Navarro, Julien, Kitt, Jonathan, Choulet, Frédéric, Leveugle, Magalie, Duarte, Jorge, Rivière, Nathalie, Eversole, Kellye, Le Gouis, Jacques, Davassi, Alessandro, Balfourier, François, Le Paslier, Marie-Christine, Berard, Aurélie, Brunel, Dominique, Feuillet, Catherine, Poncet, Charles, Sourdille, Pierre, Paux, Etienne
Publicado 2018

FANCM Limits Meiotic Crossovers in Brassica Crops

por Blary, Aurélien, Gonzalo, Adrián, Eber, Frédérique, Bérard, Aurélie, Bergès, Hélène, Bessoltane, Nadia, Charif, Delphine, Charpentier, Catherine, Cromer, Laurence, Fourment, Joelle, Genevriez, Camille, Le Paslier, Marie-Christine, Lodé, Maryse, Lucas, Marie-Odile, Nesi, Nathalie, Lloyd, Andrew, Chèvre, Anne-Marie, Jenczewski, Eric
Publicado 2018

Corrigendum: FANCM Limits Meiotic Crossovers in Brassica Crops

por Blary, Aurélien, Gonzalo, Adrián, Eber, Frédérique, Bérard, Aurélie, Bergès, Hélène, Bessoltane, Nadia, Charif, Delphine, Charpentier, Catherine, Cromer, Laurence, Fourment, Joelle, Genevriez, Camille, Le Paslier, Marie-Christine, Lodé, Maryse, Lucas, Marie-Odile, Nesi, Nathalie, Lloyd, Andrew, Chèvre, Anne-Marie, Jenczewski, Eric
Publicado 2020