k mdiff, large-scale and user-friendly differential k-mer analyses

por Lemane, Téo, Chikhi, Rayan, Peterlongo, Pierre
Publicado 2022

kmtricks: efficient and flexible construction of Bloom filters for large sequencing data collections

por Lemane, Téo, Medvedev, Paul, Chikhi, Rayan, Peterlongo, Pierre
Publicado 2022

Identification of isolated or mixed strains from long reads: a challenge met on Streptococcus thermophilus using a MinION sequencer

por Siekaniec, Grégoire, Roux, Emeline, Lemane, Téo, Guédon, Eric, Nicolas, Jacques
Publicado 2021

decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods

por Duitama González, Camila, Vicedomini, Riccardo, Lemane, Téo, Rascovan, Nicolas, Richard, Hugues, Chikhi, Rayan
Publicado 2023

The K-mer File Format: a standardized and compact disk representation of sets of k-mers

por Dufresne, Yoann, Lemane, Teo, Marijon, Pierre, Peterlongo, Pierre, Rahman, Amatur, Kokot, Marek, Medvedev, Paul, Deorowicz, Sebastian, Chikhi, Rayan
Publicado 2022