An Integrated Approach for Identifying Wrongly Labelled Samples When Performing Classification in Microarray Data

por Leung, Yuk Yee, Chang, Chun Qi, Hung, Yeung Sam
Publicado 2012

Polygenic Risk Scores in Alzheimer’s Disease Genetics: Methodology, Applications, Inclusion, and Diversity

por Clark, Kaylyn, Leung, Yuk Yee, Lee, Wan-Ping, Voight, Benjamin, Wang, Li-San
Publicado 2022

CoRAL: predicting non-coding RNAs from small RNA-sequencing data

por Leung, Yuk Yee, Ryvkin, Paul, Ungar, Lyle H., Gregory, Brian D., Wang, Li-San
Publicado 2013

hipFG: High-throughput harmonization and integration pipeline for functional genomics data

por Cifello, Jeffrey, Kuksa, Pavel P., Saravanan, Naveensri, Valladares, Otto, Leung, Yuk Yee, Wang, Li-San
Publicado 2023

hipFG: high-throughput harmonization and integration pipeline for functional genomics data

por Cifello, Jeffrey, Kuksa, Pavel P, Saravanan, Naveensri, Valladares, Otto, Wang, Li-San, Leung, Yuk Yee
Publicado 2023

SPAR: small RNA-seq portal for analysis of sequencing experiments

por Kuksa, Pavel P, Amlie-Wolf, Alexandre, Katanić, Živadin, Valladares, Otto, Wang, Li-San, Leung, Yuk Yee
Publicado 2018

DASHR 2.0: integrated database of human small non-coding RNA genes and mature products

por Kuksa, Pavel P, Amlie-Wolf, Alexandre, Katanić, Živadin, Valladares, Otto, Wang, Li-San, Leung, Yuk Yee
Publicado 2019

HiPR: High-throughput probabilistic RNA structure inference

por Kuksa, Pavel P., Li, Fan, Kannan, Sampath, Gregory, Brian D., Leung, Yuk Yee, Wang, Li-San
Publicado 2020

HAMR: high-throughput annotation of modified ribonucleotides

por Ryvkin, Paul, Leung, Yuk Yee, Silverman, Ian M., Childress, Micah, Valladares, Otto, Dragomir, Isabelle, Gregory, Brian D., Wang, Li-San
Publicado 2013

DASHR: database of small human noncoding RNAs

por Leung, Yuk Yee, Kuksa, Pavel P., Amlie-Wolf, Alexandre, Valladares, Otto, Ungar, Lyle H., Kannan, Sampath, Gregory, Brian D., Wang, Li-San
Publicado 2016

Scalable approaches for functional analyses of whole-genome sequencing non-coding variants

por Kuksa, Pavel P, Greenfest-Allen, Emily, Cifello, Jeffrey, Ionita, Matei, Wang, Hui, Nicaretta, Heather, Cheng, Po-Liang, Lee, Wan-Ping, Wang, Li-San, Leung, Yuk Yee
Publicado 2022

Functional annotation of genomic variants in studies of late-onset Alzheimer’s disease

por Butkiewicz, Mariusz, Blue, Elizabeth E, Leung, Yuk Yee, Jian, Xueqiu, Marcora, Edoardo, Renton, Alan E, Kuzma, Amanda, Wang, Li-San, Koboldt, Daniel C, Haines, Jonathan L, Bush, William S
Publicado 2018

FILER: a framework for harmonizing and querying large-scale functional genomics knowledge

por Kuksa, Pavel P, Leung, Yuk Yee, Gangadharan, Prabhakaran, Katanic, Zivadin, Kleidermacher, Lauren, Amlie-Wolf, Alexandre, Lee, Chien-Yueh, Qu, Liming, Greenfest-Allen, Emily, Valladares, Otto, Wang, Li-San
Publicado 2022

VCPA: genomic variant calling pipeline and data management tool for Alzheimer’s Disease Sequencing Project

por Leung, Yuk Yee, Valladares, Otto, Chou, Yi-Fan, Lin, Han-Jen, Kuzma, Amanda B, Cantwell, Laura, Qu, Liming, Gangadharan, Prabhakaran, Salerno, William J, Schellenberg, Gerard D, Wang, Li-San
Publicado 2019

VCPA: genomic variant calling pipeline and data management tool for Alzheimer’s Disease Sequencing Project

por Leung, Yuk Yee, Valladares, Otto, Chou, Yi-Fan, Lin, Han-Jen, Kuzma, Amanda B, Cantwell, Laura, Qu, Liming, Gangadharan, Prabhakaran, Salerno, William J, Schellenberg, Gerard D, Wang, Li-San
Publicado 2019

Copy Number Variation Identification on 3,800 Alzheimer’s Disease Whole Genome Sequencing Data from the Alzheimer’s Disease Sequencing Project

por Lee, Wan-Ping, Tucci, Albert A., Conery, Mitchell, Leung, Yuk Yee, Kuzma, Amanda B., Valladares, Otto, Chou, Yi-Fan, Lu, Wenbin, Wang, Li-San, Schellenberg, Gerard D., Tzeng, Jung-Ying
Publicado 2021

SparkINFERNO: a scalable high-throughput pipeline for inferring molecular mechanisms of non-coding genetic variants

por Kuksa, Pavel P, Lee, Chien-Yueh, Amlie-Wolf, Alexandre, Gangadharan, Prabhakaran, Mlynarski, Elizabeth E, Chou, Yi-Fan, Lin, Han-Jen, Issen, Heather, Greenfest-Allen, Emily, Valladares, Otto, Leung, Yuk Yee, Wang, Li-San
Publicado 2020

Structural Variation Detection and Association Analysis of Whole-Genome-Sequence Data from 16,905 Alzheimer’s Diseases Sequencing Project Subjects

por Lee, Wan-Ping, Wang, Hui, Dombroski, Beth, Cheng, Po-Liang, Tucci, Albert, Si, Ya-qin, Farrell, John, Tzeng, Jung-Ying, Leung, Yuk Yee, Malamon, John, Wang, Li-San, Vardarajan, Badri, Farrer, Lindsay, Schellenberg, Gerard
Publicado 2023

ApoJ/Clusterin concentrations are determinants of cerebrospinal fluid cholesterol efflux capacity and reduced levels are associated with Alzheimer’s disease

por Ko, Yi-An, Billheimer, Jeffrey T., Lyssenko, Nicholas N., Kueider-Paisley, Alexandra, Wolk, David A., Arnold, Steven E., Leung, Yuk Yee, Shaw, Leslie M., Trojanowski, John Q., Kaddurah-Daouk, Rima F., Kling, Mitchel A., Rader, Daniel J.
Publicado 2022

Structural Variation Detection and Association Analysis of Whole-Genome-Sequence Data from 16,905 Alzheimer’s Diseases Sequencing Project Subjects

por Wang, Hui, Dombroski, Beth A, Cheng, Po-Liang, Tucci, Albert, Si, Ya-Qin, Farrell, John J, Tzeng, Jung-Ying, Leung, Yuk Yee, Malamon, John S, Wang, Li-San, Vardarajan, Badri N, Farrer, Lindsay A, Schellenberg, Gerard D, Lee, Wan-Ping
Publicado 2023