1449. Evaluation of Cloud-Based Automated Analytic Pipelines for Whole Genome Sequencing Analysis of Multidrug-Resistant Gram-Negative Organism Outbreaks

por Jacobs, Emily B, Ross, Tracy, Bergman, Yehudit, Lewis, Shawna, Carroll, Karen C, Simner, Patricia J
Publicado 2023

Comparison of an Automated Plate Assessment System (APAS Independence) and Artificial Intelligence (AI) to Manual Plate Reading of Methicillin-Resistant and Methicillin-Susceptible...

por Gammel, Natalie, Ross, Tracy L., Lewis, Shawna, Olson, Melissa, Henciak, Susan, Harris, Renee, Hanlon, Ann, Carroll, Karen C.
Publicado 2021

Automated antimicrobial susceptibility testing and antimicrobial resistance genotyping using Illumina and Oxford Nanopore Technologies sequencing data among Enterobacteriaceae

por Conzemius, Rick, Bergman, Yehudit, Májek, Peter, Beisken, Stephan, Lewis, Shawna, Jacobs, Emily B., Tamma, Pranita D., Simner, Patricia J.
Publicado 2022

2487. Which Extended-Spectrum β-Lactamase-Producing Enterobacterales Colonize the Gastrointestinal Tract of High-Risk Patients?

por Stambaugh, Haley, Lewis, Shawna, Jacobs, Emily B, Hareza, Dariusz A, Bergman, Yehudit, Cosgrove, Sara E, Tamma, Pranita, Simner, Patricia J
Publicado 2023

Droplet‐Based Single‐Cell Measurements of 16S rRNA Enable Integrated Bacteria Identification and Pheno‐Molecular Antimicrobial Susceptibility Testing from Clinical Samples in 30 mi...

por Kaushik, Aniruddha M., Hsieh, Kuangwen, Mach, Kathleen E., Lewis, Shawna, Puleo, Christopher M., Carroll, Karen C., Liao, Joseph C., Wang, Tza‐Huei
Publicado 2021

Validation and Application of Long-Read Whole-Genome Sequencing for Antimicrobial Resistance Gene Detection and Antimicrobial Susceptibility Testing

por Weinmaier, Thomas, Conzemius, Rick, Bergman, Yehudit, Lewis, Shawna, Jacobs, Emily B., Tamma, Pranita D., Materna, Arne, Weinberger, Johannes, Beisken, Stephan, Simner, Patricia J.
Publicado 2022

Multicentre genetic diversity study of carbapenem-resistant Enterobacterales: predominance of untypeable pUVA-like bla(KPC) bearing plasmids

por Simner, Patricia J, Bergman, Yehudit, Fan, Yunfan, Jacobs, Emily B, Ramakrishnan, Srividya, Lu, Jennifer, Lewis, Shawna, Hanlon, Ann, Tamma, Pranita D, Schatz, Michael C, Timp, Winston, Carroll, Karen C
Publicado 2023

Multicenter Evaluation of a PCR-Based Digital Microfluidics and Electrochemical Detection System for the Rapid Identification of 15 Fungal Pathogens Directly from Positive Blood Cu...

por Zhang, Sean X., Carroll, Karen C., Lewis, Shawna, Totten, Marissa, Mead, Peter, Samuel, Linoj, Steed, Lisa L., Nolte, Frederick S., Thornberg, Adam, Reid, Jennifer L., Whitfield, Natalie N., Babady, N. Esther
Publicado 2020

A Multicenter Study of the Revogene C. difficile System for Detection of the Toxin B Gene from Unformed Stool Specimens

por Mashock, Michael J., Faron, Matthew L., Carroll, Karen C., Dang, Christina, Lewis, Shawna, Salimnia, Hossein, Lephart, Paul, Loo, Vivian G., Schmitt, Bryan H., Young, Stephen, Buchan, Blake W., Ledeboer, Nathan A.
Publicado 2020

Clinical Performance of the Novel GenMark Dx ePlex Blood Culture ID Gram-Positive Panel

por Carroll, Karen C., Reid, Jennifer L., Thornberg, Adam, Whitfield, Natalie N., Trainor, Deirdre, Lewis, Shawna, Wakefield, Teresa, Davis, Thomas E., Church, Keisha G., Samuel, Linoj, Mills, Ray, Jim, Patricia, Young, Stephen, Nolte, Frederick S.
Publicado 2020