HiCDB: a sensitive and robust method for detecting contact domain boundaries

por Chen, Fengling, Li, Guipeng, Zhang, Michael Q, Chen, Yang
Publicado 2018

DG-Affinity: predicting antigen–antibody affinity with language models from sequences

por Yuan, Ye, Chen, Qushuo, Mao, Jun, Li, Guipeng, Pan, Xiaoyong
Publicado 2023

ChIA-PET2: a versatile and flexible pipeline for ChIA-PET data analysis

por Li, Guipeng, Chen, Yang, Snyder, Michael P., Zhang, Michael Q.
Publicado 2017

Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid Mice

por Liang, Weizheng, Zou, Xudong, Li, Guipeng, Zhou, Shaojie, Tian, Chi, Schaefke, Bernhard
Publicado 2021

3CPET: finding co-factor complexes from ChIA-PET data using a hierarchical Dirichlet process

por Djekidel, Mohamed Nadhir, Liang, Zhengyu, Wang, Qi, Hu, Zhirui, Li, Guipeng, Chen, Yang, Zhang, Michael Q.
Publicado 2015

BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions

por Liang, Zhengyu, Li, Guipeng, Wang, Zejun, Djekidel, Mohamed Nadhir, Li, Yanjian, Qian, Min-Ping, Zhang, Michael Q., Chen, Yang
Publicado 2017

ModuleRole: A Tool for Modulization, Role Determination and Visualization in Protein-Protein Interaction Networks

por Li, GuiPeng, Li, Ming, Zhang, YiWei, Wang, Dong, Li, Rong, Guimerà, Roger, Gao, Juntao Tony, Zhang, Michael Q.
Publicado 2014

CASB: a concanavalin A‐based sample barcoding strategy for single‐cell sequencing

por Fang, Liang, Li, Guipeng, Sun, Zhiyuan, Zhu, Qionghua, Cui, Huanhuan, Li, Yunfei, Zhang, Jingwen, Liang, Weizheng, Wei, Wencheng, Hu, Yuhui, Chen, Wei
Publicado 2021

Alterations of specific chromatin conformation affect ATRA-induced leukemia cell differentiation

por Li, Yanjian, He, Yi, Liang, Zhengyu, Wang, Yang, Chen, Fengling, Djekidel, Mohamed Nadhir, Li, Guipeng, Zhang, Xu, Xiang, Shuqin, Wang, Zejun, Gao, Juntao, Zhang, Michael Q., Chen, Yang
Publicado 2018

Pan‐tissue analysis of allelic alternative polyadenylation suggests widespread functional regulation

por Li, Yisheng, Schaefke, Bernhard, Zou, Xudong, Zhang, Min, Heyd, Florian, Sun, Wei, Zhang, Bin, Li, Guipeng, Liang, Weizheng, He, Yuhao, Zhou, Juexiao, Li, Yunfei, Fang, Liang, Hu, Yuhui, Chen, Wei
Publicado 2020

Mammalian splicing divergence is shaped by drift, buffering in trans, and a scaling law

por Zou, Xudong, Schaefke, Bernhard, Li, Yisheng, Jia, Fujian, Sun, Wei, Li, Guipeng, Liang, Weizheng, Reif, Tristan, Heyd, Florian, Gao, Qingsong, Tian, Shuye, Li, Yanping, Tang, Yisen, Fang, Liang, Hu, Yuhui, Chen, Wei
Publicado 2021

Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus

por Wang, Xi, You, Xintian, Langer, Julian D., Hou, Jingyi, Rupprecht, Fiona, Vlatkovic, Irena, Quedenau, Claudia, Tushev, Georgi, Epstein, Irina, Schaefke, Bernhard, Sun, Wei, Fang, Liang, Li, Guipeng, Hu, Yuhui, Schuman, Erin M., Chen, Wei
Publicado 2019

CIGAR‐seq, a CRISPR/Cas‐based method for unbiased screening of novel mRNA modification regulators

por Fang, Liang, Wang, Wen, Li, Guipeng, Zhang, Li, Li, Jun, Gan, Diwen, Yang, Jiao, Tang, Yisen, Ding, Zewen, Zhang, Min, Zhang, Wenhao, Deng, Daqi, Song, Zhengyu, Zhu, Qionghua, Cui, Huanhuan, Hu, Yuhui, Chen, Wei
Publicado 2020