Enhanced Detection of Post-Transcriptional Modifications Using a Mass-Exclusion List Strategy for RNA Modification Mapping by LC-MS/MS

por Cao, Xiaoyu, Limbach, Patrick A.
Publicado 2015

Relative quantitation of transfer RNAs using liquid chromatography mass spectrometry and signature digestion products

por Castleberry, Colette M., Limbach, Patrick A.
Publicado 2010

The identification and characterization of non-coding and coding RNAs and their modified nucleosides by mass spectrometry

por Gaston, Kirk W, Limbach, Patrick A
Publicado 2015

Characterization of UVA-Induced Alterations to Transfer RNA Sequences

por Sun, Congliang, Limbach, Patrick A., Addepalli, Balasubrahmanyam
Publicado 2020

Detection of RNA nucleoside modifications with the uridine-specific ribonuclease MC1 from Momordica charantia

por Addepalli, Balasubrahmanym, Lesner, Nicholas P., Limbach, Patrick A.
Publicado 2015

Mapping Post-Transcriptional Modifications onto Transfer Ribonucleic Acid Sequences by Liquid Chromatography Tandem Mass Spectrometry

por Ross, Robert L., Cao, Xiaoyu, Limbach, Patrick A.
Publicado 2017

Multiple Enzymatic Digestions and Ion Mobility Separation Improve Quantification of Bacterial Ribosomal Proteins by Data Independent Acquisition Liquid Chromatography−Mass Spectrom...

por Dator, Romel P., Gaston, Kirk W., Limbach, Patrick A.
Publicado 2014

RNA Cleavage Properties of Nucleobase-Specific RNase MC1 and Cusativin Are Determined by the Dinucleotide-Binding Interactions in the Enzyme-Active Site

por Thakur, Priti, Atway, Jowad, Limbach, Patrick A., Addepalli, Balasubrahmanyam
Publicado 2022

Oxidized Amino Acid Residues in the Vicinity of Q(A) and Pheo(D1) of the Photosystem II Reaction Center: Putative Generation Sites of Reducing-Side Reactive Oxygen Species

por Frankel, Laurie K., Sallans, Larry, Limbach, Patrick A., Bricker, Terry M.
Publicado 2013

Oxidative Damage to RNA is Altered by the Presence of Interacting Proteins or Modified Nucleosides

por Estevez, Mariana, Valesyan, Satenik, Jora, Manasses, Limbach, Patrick A., Addepalli, Balasubrahmanyam
Publicado 2021

RoboOligo: software for mass spectrometry data to support manual and de novo sequencing of post-transcriptionally modified ribonucleic acids

por Sample, Paul J., Gaston, Kirk W., Alfonzo, Juan D., Limbach, Patrick A.
Publicado 2015

Distinct substrate specificities of the human tRNA methyltransferases TRMT10A and TRMT10B

por Howell, Nathan W., Jora, Manasses, Jepson, Benjamin F., Limbach, Patrick A., Jackman, Jane E.
Publicado 2019

Dynamic 23S rRNA modification ho(5)C2501 benefits Escherichia coli under oxidative stress

por Fasnacht, Michel, Gallo, Stefano, Sharma, Puneet, Himmelstoß, Maximilian, Limbach, Patrick A, Willi, Jessica, Polacek, Norbert
Publicado 2021

Life without tRNA(Ile)-lysidine synthetase: translation of the isoleucine codon AUA in Bacillus subtilis lacking the canonical tRNA(2)(Ile)

por Köhrer, Caroline, Mandal, Debabrata, Gaston, Kirk W., Grosjean, Henri, Limbach, Patrick A., RajBhandary, Uttam L.
Publicado 2014

Pytheas: a software package for the automated analysis of RNA sequences and modifications via tandem mass spectrometry

por D’Ascenzo, Luigi, Popova, Anna M., Abernathy, Scott, Sheng, Kai, Limbach, Patrick A., Williamson, James R.
Publicado 2022

Identification of a Novel Epoxyqueuosine Reductase Family by Comparative Genomics

por Zallot, Rémi, Ross, Robert, Chen, Wei-Hung, Bruner, Steven D., Limbach, Patrick A., de Crécy-Lagard, Valérie
Publicado 2017

Selective terminal methylation of a tRNA wobble base

por Masuda, Isao, Takase, Ryuichi, Matsubara, Ryuma, Paulines, Mellie June, Gamper, Howard, Limbach, Patrick A, Hou, Ya-Ming
Publicado 2018

Preferential import of queuosine-modified tRNAs into Trypanosoma brucei mitochondrion is critical for organellar protein synthesis

por Kulkarni, Sneha, Rubio, Mary Anne T, Hegedűsová, Eva, Ross, Robert L, Limbach, Patrick A, Alfonzo, Juan D, Paris, Zdeněk
Publicado 2021

m(6)A RNA methylation orchestrates transcriptional dormancy during developmental pausing

por Collignon, Evelyne, Cho, Brandon, Fothergill-Robinson, Julie, Furlan, Giacomo, Ross, Robert L., Limbach, Patrick A., Ramalho-Santos, Miguel
Publicado 2023

Functional characterization of the YmcB and YqeV tRNA methylthiotransferases of Bacillus subtilis

por Anton, Brian P., Russell, Susan P., Vertrees, Jason, Kasif, Simon, Raleigh, Elisabeth A., Limbach, Patrick A., Roberts, Richard J.
Publicado 2010