Reconstruction of human protein interolog network using evolutionary conserved network

por Huang, Tao-Wei, Lin, Chung-Yen, Kao, Cheng-Yan
Publicado 2007

Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform

por Huang, Chih-Wei, Chuang, Wei-Hsuan, Lin, Chung-Yen, Chen, Shu-Hwa
Publicado 2022

SQUAT: a Sequencing Quality Assessment Tool for data quality assessments of genome assemblies

por Yang, Li-An, Chang, Yu-Jung, Chen, Shu-Hwa, Lin, Chung-Yen, Ho, Jan-Ming
Publicado 2019

The unique probe selector: a comprehensive web service for probe design and oligonucleotide arrays

por Chen, Shu-Hwa, Lo, Chen-Zen, Tsai, Ming-Chi, Hsiung, Chao A, Lin, Chung-Yen
Publicado 2008

A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles

por Chin, Chia-Hao, Chen, Shu-Hwa, Ho, Chin-Wen, Ko, Ming-Tat, Lin, Chung-Yen
Publicado 2010

Compartment-specific transcriptomics in a reef-building coral exposed to elevated temperatures

por Mayfield, Anderson B, Wang, Yu-Bin, Chen, Chii-Shiarng, Lin, Chung-Yen, Chen, Shu-Hwa
Publicado 2014

Precise genotyping and recombination detection of Enterovirus

por Lin, Chieh-Hua, Wang, Yu-Bin, Chen, Shu-Hwa, Hsiung, Chao Agnes, Lin, Chung-Yen
Publicado 2015

De Novo Assembly of the Whole Transcriptome of the Wild Embryo, Preleptocephalus, Leptocephalus, and Glass Eel of Anguilla japonica and Deciphering the Digestive and Absorptive Cap...

por Hsu, Hsiang-Yi, Chen, Shu-Hwa, Cha, Yuh-Ru, Tsukamoto, Katsumi, Lin, Chung-Yen, Han, Yu-San
Publicado 2015

Hubba: hub objects analyzer—a framework of interactome hubs identification for network biology

por Lin, Chung-Yen, Chin, Chia-Hao, Wu, Hsin-Hung, Chen, Shu-Hwa, Ho, Chin-Wen, Ko, Ming-Tat
Publicado 2008

UPS 2.0: unique probe selector for probe design and oligonucleotide microarrays at the pangenomic/ genomic level

por Chen, Shu-Hwa, Lo, Chen-Zen, Su, Sheng-Yao, Kuo, Bao-Han, Hsiung, Chao A, Lin, Chung-Yen
Publicado 2010

cytoHubba: identifying hub objects and sub-networks from complex interactome

por Chin, Chia-Hao, Chen, Shu-Hwa, Wu, Hsin-Hung, Ho, Chin-Wen, Ko, Ming-Tat, Lin, Chung-Yen
Publicado 2014

Subset selection of high-depth next generation sequencing reads for de novo genome assembly using MapReduce framework

por Fang, Chih-Hao, Chang, Yu-Jung, Chung, Wei-Chun, Hsieh, Ping-Heng, Lin, Chung-Yen, Ho, Jan-Ming
Publicado 2015

Peptide-Based Drug Predictions for Cancer Therapy Using Deep Learning

por Sun, Yih-Yun, Lin, Tzu-Tang, Cheng, Wen-Chih, Lu, I-Hsuan, Lin, Chung-Yen, Chen, Shu-Hwa
Publicado 2022

ATACgraph: Profiling Genome-Wide Chromatin Accessibility From ATAC-seq

por Lu, Rita Jui-Hsien, Liu, Yen-Ting, Huang, Chih Wei, Yen, Ming-Ren, Lin, Chung-Yen, Chen, Pao-Yang
Publicado 2021

Metagenomic analysis reveals a functional signature for biomass degradation by cecal microbiota in the leaf-eating flying squirrel (Petaurista alborufus lena)

por Lu, Hsiao-Pei, Wang, Yu-bin, Huang, Shiao-Wei, Lin, Chung-Yen, Wu, Martin, Hsieh, Chih-hao, Yu, Hon-Tsen
Publicado 2012

MetaSquare: an integrated metadatabase of 16S rRNA gene amplicon for microbiome taxonomic classification

por Liao, Chun-Chieh, Fu, Po-Ying, Huang, Chih-Wei, Chuang, Chia-Hsien, Yen, Yun, Lin, Chung-Yen, Chen, Shu-Hwa
Publicado 2022

POWER: PhylOgenetic WEb Repeater—an integrated and user-optimized framework for biomolecular phylogenetic analysis

por Lin, Chung-Yen, Lin, Fan-Kai, Lin, Chieh Hua, Lai, Li-Wei, Hsu, Hsiu-Jun, Chen, Shu-Hwa, Hsiung, Chao A.
Publicado 2005

PALM: A Paralleled and Integrated Framework for Phylogenetic Inference with Automatic Likelihood Model Selectors

por Chen, Shu-Hwa, Su, Sheng-Yao, Lo, Chen-Zen, Chen, Kuei-Hsien, Huang, Teng-Jay, Kuo, Bo-Han, Lin, Chung-Yen
Publicado 2009

Simultaneous Detection of Multiple Fish Pathogens Using a Naked-Eye Readable DNA Microarray

por Chang, Chin-I, Hung, Pei-Hsin, Wu, Chia-Che, Cheng, Ta Chih, Tsai, Jyh-Ming, Lin, King-Jung, Lin, Chung-Yen
Publicado 2012

TEA: the epigenome platform for Arabidopsis methylome study

por Su, Sheng-Yao, Chen, Shu-Hwa, Lu, I-Hsuan, Chiang, Yih-Shien, Wang, Yu-Bin, Chen, Pao-Yang, Lin, Chung-Yen
Publicado 2016