The cycle of commodification: migrant labour, welfare, and the market in global China and Vietnam

por Lin, Jake, Nguyen, Minh T. N.
Publicado 2021

MetaPhat: Detecting and Decomposing Multivariate Associations From Univariate Genome-Wide Association Statistics

por Lin, Jake, Tabassum, Rubina, Ripatti, Samuli, Pirinen, Matti
Publicado 2020

IDARE2—Simultaneous Visualisation of Multiomics Data in Cytoscape

por Pfau, Thomas, Galhardo, Mafalda, Lin, Jake, Sauter, Thomas
Publicado 2021

EPEPT: A web service for enhanced P-value estimation in permutation tests

por Knijnenburg, Theo A, Lin, Jake, Rovira, Hector, Boyle, John, Shmulevich, Ilya
Publicado 2011

Integrated analysis of transcript-level regulation of metabolism reveals disease-relevant nodes of the human metabolic network

por Galhardo, Mafalda, Sinkkonen, Lasse, Berninger, Philipp, Lin, Jake, Sauter, Thomas, Heinäniemi, Merja
Publicado 2014

Transcriptomics profiling of human SGBS adipogenesis

por Galhardo, Mafalda, Sinkkonen, Lasse, Berninger, Philipp, Lin, Jake, Sauter, Thomas, Heinäniemi, Merja
Publicado 2014

ChIP-seq profiling of the active chromatin marker H3K4me3 and PPARγ, CEBPα and LXR target genes in human SGBS adipocytes

por Galhardo, Mafalda, Sinkkonen, Lasse, Berninger, Philipp, Lin, Jake, Sauter, Thomas, Heinäniemi, Merja
Publicado 2014

Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples

por Lin, Jake, Kramna, Lenka, Autio, Reija, Hyöty, Heikki, Nykter, Matti, Cinek, Ondrej
Publicado 2017

Genetic Adaptation of Coxsackievirus B1 during Persistent Infection in Pancreatic Cells

por Honkimaa, Anni, Kimura, Bryn, Sioofy-Khojine, Amir-Babak, Lin, Jake, Laiho, Jutta, Oikarinen, Sami, Hyöty, Heikki
Publicado 2020

POMO - Plotting Omics analysis results for Multiple Organisms

por Lin, Jake, Kreisberg, Richard, Kallio, Aleksi, Dudley, Aimée M, Nykter, Matti, Shmulevich, Ilya, May, Patrick, Autio, Reija
Publicado 2013

Fastbreak: a tool for analysis and visualization of structural variations in genomic data

por Bressler, Ryan, Lin, Jake, Eakin, Andrea, Robinson, Thomas, Kreisberg, Richard, Rovira, Hector, Knijnenburg, Theo, Boyle, John, Shmulevich, Ilya
Publicado 2012

Data-driven characterization of molecular phenotypes across heterogeneous sample collections

por Mehtonen, Juha, Pölönen, Petri, Häyrynen, Sergei, Dufva, Olli, Lin, Jake, Liuksiala, Thomas, Granberg, Kirsi, Lohi, Olli, Hautamäki, Ville, Nykter, Matti, Heinäniemi, Merja
Publicado 2019

SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments

por Burdick, David B, Cavnor, Chris C, Handcock, Jeremy, Killcoyne, Sarah, Lin, Jake, Marzolf, Bruz, Ramsey, Stephen A, Rovira, Hector, Bressler, Ryan, Shmulevich, Ilya, Boyle, John
Publicado 2010

High-throughput Tetrad Analysis

por Ludlow, Catherine L., Scott, Adrian C., Cromie, Gareth A., Jeffery, Eric W., Sirr, Amy, May, Patrick, Lin, Jake, Gilbert, Teresa L., Hays, Michelle, Dudley, Aimée M.
Publicado 2013

Unraveling the metabolic underpinnings of frailty using multicohort observational and Mendelian randomization analyses

por Mak, Jonathan K. L., Kananen, Laura, Qin, Chenxi, Kuja‐Halkola, Ralf, Tang, Bowen, Lin, Jake, Wang, Yunzhang, Jääskeläinen, Tuija, Koskinen, Seppo, Lu, Yi, Magnusson, Patrik K. E., Hägg, Sara, Jylhävä, Juulia
Publicado 2023

Metagenomics of the faecal virome indicate a cumulative effect of enterovirus and gluten amount on the risk of coeliac disease autoimmunity in genetically at risk children: the TED...

por Lindfors, Katri, Lin, Jake, Lee, Hye-Seung, Hyöty, Heikki, Nykter, Matti, Kurppa, Kalle, Liu, Edwin, Koletzko, Sibylle, Rewers, Marian, Hagopian, William, Toppari, Jorma, Ziegler, Annette-Gabriele, Akolkar, Beena, Krischer, Jeffrey P, Petrosino, Joseph F, Lloyd, Richard E, Agardh, Daniel
Publicado 2020

Polygenic Hyperlipidemias and Coronary Artery Disease Risk

por Ripatti, Pietari, Rämö, Joel T., Mars, Nina J., Fu, Yu, Lin, Jake, Söderlund, Sanni, Benner, Christian, Surakka, Ida, Kiiskinen, Tuomo, Havulinna, Aki S., Palta, Priit, Freimer, Nelson B., Widén, Elisabeth, Salomaa, Veikko, Tukiainen, Taru, Pirinen, Matti, Palotie, Aarno, Taskinen, Marja-Riitta, Ripatti, Samuli
Publicado 2020

Systems genomics evaluation of the SH-SY5Y neuroblastoma cell line as a model for Parkinson’s disease

por Krishna, Abhimanyu, Biryukov, Maria, Trefois, Christophe, Antony, Paul MA, Hussong, Rene, Lin, Jake, Heinäniemi, Merja, Glusman, Gustavo, Köglsberger, Sandra, Boyd, Olga, van den Berg, Bart HJ, Linke, Dennis, Huang, David, Wang, Kai, Hood, Leroy, Tholey, Andreas, Schneider, Reinhard, Galas, David J, Balling, Rudi, May, Patrick
Publicado 2014

Distinct transcriptomic profiles in children prior to the appearance of type 1 diabetes-linked islet autoantibodies and following enterovirus infection

por Lin, Jake, Moradi, Elaheh, Salenius, Karoliina, Lehtipuro, Suvi, Häkkinen, Tomi, Laiho, Jutta E., Oikarinen, Sami, Randelin, Sofia, Parikh, Hemang M., Krischer, Jeffrey P., Toppari, Jorma, Lernmark, Åke, Petrosino, Joseph F., Ajami, Nadim J., She, Jin-Xiong, Hagopian, William A., Rewers, Marian J., Lloyd, Richard E., Rautajoki, Kirsi J., Hyöty, Heikki, Nykter, Matti
Publicado 2023

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage

por Muller, Emilie E. L., Pinel, Nicolás, Laczny, Cédric C., Hoopmann, Michael R., Narayanasamy, Shaman, Lebrun, Laura A., Roume, Hugo, Lin, Jake, May, Patrick, Hicks, Nathan D., Heintz-Buschart, Anna, Wampach, Linda, Liu, Cindy M., Price, Lance B., Gillece, John D., Guignard, Cédric, Schupp, James M., Vlassis, Nikos, Baliga, Nitin S., Moritz, Robert L., Keim, Paul S., Wilmes, Paul
Publicado 2014