Identification of a Novel Nematotoxic Protein by Challenging the Model Mushroom Coprinopsis cinerea with a Fungivorous Nematode

por Plaza, David Fernando, Schmieder, Stefanie Sofia, Lipzen, Anna, Lindquist, Erika, Künzler, Markus
Publicado 2015

Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation

por Young, Darcy, Rice, James, Martin, Rachael, Lindquist, Erika, Lipzen, Anna, Grigoriev, Igor, Hibbett, David
Publicado 2015

Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth

por Bluhm, Burton H, Dhillon, Braham, Lindquist, Erika A, Kema, Gert HJ, Goodwin, Stephen B, Dunkle, Larry D
Publicado 2008

The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database

por Tagmount, Abderrahmane, Wang, Mei, Lindquist, Erika, Tanaka, Yoshihiro, Teranishi, Kristen S., Sunagawa, Shinichi, Wong, Mike, Stillman, Jonathon H.
Publicado 2010

Symbiodinium Transcriptomes: Genome Insights into the Dinoflagellate Symbionts of Reef-Building Corals

por Bayer, Till, Aranda, Manuel, Sunagawa, Shinichi, Yum, Lauren K., DeSalvo, Michael K., Lindquist, Erika, Coffroth, Mary Alice, Voolstra, Christian R., Medina, Mónica
Publicado 2012

Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1

por Firrincieli, Andrea, Otillar, Robert, Salamov, Asaf, Schmutz, Jeremy, Khan, Zareen, Redman, Regina S., Fleck, Neil D., Lindquist, Erika, Grigoriev, Igor V., Doty, Sharon L.
Publicado 2015

Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus

por Casarrubia, Salvatore, Martino, Elena, Daghino, Stefania, Kohler, Annegret, Morin, Emmanuelle, Khouja, Hassine-Radhouane, Murat, Claude, Barry, Kerrie W., Lindquist, Erika A., Martin, Francis M., Perotto, Silvia
Publicado 2020

Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment

por Voolstra, Christian R., Sunagawa, Shinichi, Matz, Mikhail V., Bayer, Till, Aranda, Manuel, Buschiazzo, Emmanuel, DeSalvo, Michael K., Lindquist, Erika, Szmant, Alina M., Coffroth, Mary Alice, Medina, Mónica
Publicado 2011

Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey

por Seidl, Verena, Song, Lifu, Lindquist, Erika, Gruber, Sabine, Koptchinskiy, Alexeji, Zeilinger, Susanne, Schmoll, Monika, Martínez, Pedro, Sun, Jibin, Grigoriev, Igor, Herrera-Estrella, Alfredo, Baker, Scott E, Kubicek, Christian P
Publicado 2009

Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous Fungus Neurospora tetrasperma

por Ellison, Christopher E., Stajich, Jason E., Jacobson, David J., Natvig, Donald O., Lapidus, Alla, Foster, Brian, Aerts, Andrea, Riley, Robert, Lindquist, Erika A., Grigoriev, Igor V., Taylor, John W.
Publicado 2011

The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown-rot mechanism involving Fenton chemistry

por Rineau, Francois, Roth, Doris, Shah, Firoz, Smits, Mark, Johansson, Tomas, Canbäck, Björn, Olsen, Peter Bjarke, Persson, Per, Grell, Morten Nedergaard, Lindquist, Erika, Grigoriev, Igor V, Lange, Lene, Tunlid, Anders
Publicado 2012

A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing

por Martin, Jeffrey A., Johnson, Nicole V., Gross, Stephen M., Schnable, James, Meng, Xiandong, Wang, Mei, Coleman-Derr, Devin, Lindquist, Erika, Wei, Chia-Lin, Kaeppler, Shawn, Chen, Feng, Wang, Zhong
Publicado 2014

Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants

por Chang, Ying, Wang, Sishuo, Sekimoto, Satoshi, Aerts, Andrea L., Choi, Cindy, Clum, Alicia, LaButti, Kurt M., Lindquist, Erika A., Yee Ngan, Chew, Ohm, Robin A., Salamov, Asaf A., Grigoriev, Igor V., Spatafora, Joseph W., Berbee, Mary L.
Publicado 2015

Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle

por Murat, Claude, Kuo, Alan, Barry, Kerrie W., Clum, Alicia, Dockter, Rhyan B., Fauchery, Laure, Iotti, Mirco, Kohler, Annegret, LaButti, Kurt, Lindquist, Erika A., Lipzen, Anna, Morin, Emmanuelle, Wang, Mei, Grigoriev, Igor V., Zambonelli, Alessandra, Martin, Francis M.
Publicado 2018

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage

por Mosier, Annika C., Miller, Christopher S., Frischkorn, Kyle R., Ohm, Robin A., Li, Zhou, LaButti, Kurt, Lapidus, Alla, Lipzen, Anna, Chen, Cindy, Johnson, Jenifer, Lindquist, Erika A., Pan, Chongle, Hettich, Robert L., Grigoriev, Igor V., Singer, Steven W., Banfield, Jillian F.
Publicado 2016

Draft Nuclear Genome Sequence of the Halophilic and Beta-Carotene-Accumulating Green Alga Dunaliella salina Strain CCAP19/18

por Polle, Juergen E. W., Barry, Kerrie, Cushman, John, Schmutz, Jeremy, Tran, Duc, Hathwaik, Leyla T., Yim, Won C., Jenkins, Jerry, McKie-Krisberg, Zaid, Prochnik, Simon, Lindquist, Erika, Dockter, Rhyan B., Adam, Catherine, Molina, Henrik, Bunkenborg, Jakob, Jin, EonSeon, Buchheim, Mark, Magnuson, Jon
Publicado 2017

Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant–cyanobacteria symbiosis

por Warshan, Denis, Espinoza, Josh L, Stuart, Rhona K, Richter, R Alexander, Kim, Sea-Yong, Shapiro, Nicole, Woyke, Tanja, C Kyrpides, Nikos, Barry, Kerrie, Singan, Vasanth, Lindquist, Erika, Ansong, Charles, Purvine, Samuel O, M Brewer, Heather, Weyman, Philip D, Dupont, Christopher L, Rasmussen, Ulla
Publicado 2017

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations

por Satou, Yutaka, Mineta, Katsuhiko, Ogasawara, Michio, Sasakura, Yasunori, Shoguchi, Eiichi, Ueno, Keisuke, Yamada, Lixy, Matsumoto, Jun, Wasserscheid, Jessica, Dewar, Ken, Wiley, Graham B, Macmil, Simone L, Roe, Bruce A, Zeller, Robert W, Hastings, Kenneth EM, Lemaire, Patrick, Lindquist, Erika, Endo, Toshinori, Hotta, Kohji, Inaba, Kazuo
Publicado 2008

The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

por Blanc, Guillaume, Agarkova, Irina, Grimwood, Jane, Kuo, Alan, Brueggeman, Andrew, Dunigan, David D, Gurnon, James, Ladunga, Istvan, Lindquist, Erika, Lucas, Susan, Pangilinan, Jasmyn, Pröschold, Thomas, Salamov, Asaf, Schmutz, Jeremy, Weeks, Donald, Yamada, Takashi, Lomsadze, Alexandre, Borodovsky, Mark, Claverie, Jean-Michel, Grigoriev, Igor V, Van Etten, James L
Publicado 2012

Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States)

por Davenport, Emily J., Neudeck, Michelle J., Matson, Paul G., Bullerjahn, George S., Davis, Timothy W., Wilhelm, Steven W., Denney, Maddie K., Krausfeldt, Lauren E., Stough, Joshua M. A., Meyer, Kevin A., Dick, Gregory J., Johengen, Thomas H., Lindquist, Erika, Tringe, Susannah G., McKay, Robert Michael L.
Publicado 2019