The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training

por Tractenberg, Rochelle E., Lindvall, Jessica M., Attwood, Teresa K., Via, Allegra
Publicado 2019

Custom Design and Analysis of High-Density Oligonucleotide Bacterial Tiling Microarrays

por Thomassen, Gard O. S., Rowe, Alexander D., Lagesen, Karin, Lindvall, Jessica M., Rognes, Torbjørn
Publicado 2009

Differential Evolutionary Wiring of the Tyrosine Kinase Btk

por Nawaz, Hossain M., Kylsten, Per, Hamada, Noriko, Yamamoto, Daisuke, Smith, C. I. Edvard, Lindvall, Jessica M.
Publicado 2012

Nubbin isoform antagonism governs Drosophila intestinal immune homeostasis

por Lindberg, Bo G., Tang, Xiongzhuo, Dantoft, Widad, Gohel, Priya, Seyedoleslami Esfahani, Shiva, Lindvall, Jessica M., Engström, Ylva
Publicado 2018

The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota

por Dantoft, Widad, Davis, Monica M, Lindvall, Jessica M, Tang, Xiongzhuo, Uvell, Hanna, Junell, Anna, Beskow, Anne, Engström, Ylva
Publicado 2013

A microarray whole-genome gene expression dataset in a rat model of inflammatory corneal angiogenesis

por Mukwaya, Anthony, Lindvall, Jessica M., Xeroudaki, Maria, Peebo, Beatrice, Ali, Zaheer, Lennikov, Anton, Jensen, Lasse Dahl Ejby, Lagali, Neil
Publicado 2016

Transcriptional signatures of Itk-deficient CD3(+), CD4(+ )and CD8(+ )T-cells

por Blomberg, K Emelie M, Boucheron, Nicole, Lindvall, Jessica M, Yu, Liang, Raberger, Julia, Berglöf, Anna, Ellmeier, Wilfried, Smith, CI Edvard
Publicado 2009

Hypoxia inducible factor‐2α importance for migration, proliferation, and self‐renewal of trunk neural crest cells

por Niklasson, Camilla U., Fredlund, Elina, Monni, Emanuela, Lindvall, Jessica M., Kokaia, Zaal, Hammarlund, Emma U., Bronner, Marianne E., Mohlin, Sofie
Publicado 2020

Whole blood gene expression in adolescent chronic fatigue syndrome: an exploratory cross-sectional study suggesting altered B cell differentiation and survival

por Nguyen, Chinh Bkrong, Alsøe, Lene, Lindvall, Jessica M., Sulheim, Dag, Fagermoen, Even, Winger, Anette, Kaarbø, Mari, Nilsen, Hilde, Wyller, Vegard Bruun
Publicado 2017

Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family

por Einarsdottir, Elisabet, Svensson, Idor, Darki, Fahimeh, Peyrard-Janvid, Myriam, Lindvall, Jessica M., Ameur, Adam, Jacobsson, Christer, Klingberg, Torkel, Kere, Juha, Matsson, Hans
Publicado 2015

Tiling Array Analysis of UV Treated Escherichia coli Predicts Novel Differentially Expressed Small Peptides

por Thomassen, Gard O. S., Weel-Sneve, Ragnhild, Rowe, Alexander D., Booth, James A., Lindvall, Jessica M., Lagesen, Karin, Kristiansen, Knut I., Bjørås, Magnar, Rognes, Torbjørn
Publicado 2010

In Situ Staining and Laser Capture Microdissection of Lymph Node Residing SIV Gag-Specific CD8(+) T cells—A Tool to Interrogate a Functional Immune Response Ex Vivo

por Tjernlund, Annelie, Burgener, Adam, Lindvall, Jessica M., Peng, Tao, Zhu, Jia, Öhrmalm, Lars, Picker, Louis J., Broliden, Kristina, McElrath, M. Juliana, Corey, Lawrence
Publicado 2016

Tiling array study of MNNG treated Escherichia coli reveals a widespread transcriptional response

por Booth, James A., Thomassen, Gard O. S., Rowe, Alexander D., Weel-Sneve, Ragnhild, Lagesen, Karin, Kristiansen, Knut I., Bjørås, Magnar, Rognes, Torbjørn, Lindvall, Jessica M.
Publicado 2013

Epigenetic alterations in skin homing CD4(+)CLA(+) T cells of atopic dermatitis patients

por Acevedo, Nathalie, Benfeitas, Rui, Katayama, Shintaro, Bruhn, Sören, Andersson, Anna, Wikberg, Gustav, Lundeberg, Lena, Lindvall, Jessica M., Greco, Dario, Kere, Juha, Söderhäll, Cilla, Scheynius, Annika
Publicado 2020

Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients

por Kirchner, Henriette, Sinha, Indranil, Gao, Hui, Ruby, Maxwell A., Schönke, Milena, Lindvall, Jessica M., Barrès, Romain, Krook, Anna, Näslund, Erik, Dahlman-Wright, Karin, Zierath, Juleen R.
Publicado 2016

Induction of Apoptosis in Intestinal Toxicity to a Histone Deacetylase Inhibitor in a Phase I Study with Pelvic Radiotherapy

por Kalanxhi, Erta, Risberg, Karianne, Barua, Imon S., Dueland, Svein, Waagene, Stein, Andersen, Solveig Norheim, Pettersen, Solveig J., Lindvall, Jessica M., Redalen, Kathrine Røe, Flatmark, Kjersti, Ree, Anne Hansen
Publicado 2017

Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1

por Arczewska, Katarzyna D., Tomazella, Gisele G., Lindvall, Jessica M., Kassahun, Henok, Maglioni, Silvia, Torgovnick, Alessandro, Henriksson, Johan, Matilainen, Olli, Marquis, Bryce J., Nelson, Bryant C., Jaruga, Pawel, Babaie, Eshrat, Holmberg, Carina I., Bürglin, Thomas R., Ventura, Natascia, Thiede, Bernd, Nilsen, Hilde
Publicado 2013

A framework to assess the quality and impact of bioinformatics training across ELIXIR

por Gurwitz, Kim T., Singh Gaur, Prakash, Bellis, Louisa J., Larcombe, Lee, Alloza, Eva, Balint, Balint Laszlo, Botzki, Alexander, Dimec, Jure, Dominguez del Angel, Victoria, Fernandes, Pedro L., Korpelainen, Eija, Krause, Roland, Kuzak, Mateusz, Le Pera, Loredana, Leskošek, Brane, Lindvall, Jessica M., Marek, Diana, Martinez, Paula A., Muyldermans, Tuur, Nygård, Ståle, Palagi, Patricia M., Peterson, Hedi, Psomopoulos, Fotis, Spiwok, Vojtech, van Gelder, Celia W. G., Via, Allegra, Vidak, Marko, Wibberg, Daniel, Morgan, Sarah L., Rustici, Gabriella
Publicado 2020

An international consensus on effective, inclusive, and career-spanning short-format training in the life sciences and beyond

por Williams, Jason J., Tractenberg, Rochelle E., Batut, Bérénice, Becker, Erin A., Brown, Anne M., Burke, Melissa L., Busby, Ben, Cooch, Nisha K., Dillman, Allissa A., Donovan, Samuel S., Doyle, Maria A., van Gelder, Celia W. G., Hall, Christina R., Hertweck, Kate L., Jordan, Kari L., Jungck, John R., Latour, Ainsley R., Lindvall, Jessica M., Lloret-Llinares, Marta, McDowell, Gary S., Morris, Rana, Mourad, Teresa, Nisselle, Amy, Ordóñez, Patricia, Paladin, Lisanna, Palagi, Patricia M., Sukhai, Mahadeo A., Teal, Tracy K., Woodley, Louise
Publicado 2023

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge

por Brownstein, Catherine A, Beggs, Alan H, Homer, Nils, Merriman, Barry, Yu, Timothy W, Flannery, Katherine C, DeChene, Elizabeth T, Towne, Meghan C, Savage, Sarah K, Price, Emily N, Holm, Ingrid A, Luquette, Lovelace J, Lyon, Elaine, Majzoub, Joseph, Neupert, Peter, McCallie Jr, David, Szolovits, Peter, Willard, Huntington F, Mendelsohn, Nancy J, Temme, Renee, Finkel, Richard S, Yum, Sabrina W, Medne, Livija, Sunyaev, Shamil R, Adzhubey, Ivan, Cassa, Christopher A, de Bakker, Paul IW, Duzkale, Hatice, Dworzyński, Piotr, Fairbrother, William, Francioli, Laurent, Funke, Birgit H, Giovanni, Monica A, Handsaker, Robert E, Lage, Kasper, Lebo, Matthew S, Lek, Monkol, Leshchiner, Ignaty, MacArthur, Daniel G, McLaughlin, Heather M, Murray, Michael F, Pers, Tune H, Polak, Paz P, Raychaudhuri, Soumya, Rehm, Heidi L, Soemedi, Rachel, Stitziel, Nathan O, Vestecka, Sara, Supper, Jochen, Gugenmus, Claudia, Klocke, Bernward, Hahn, Alexander, Schubach, Max, Menzel, Mortiz, Biskup, Saskia, Freisinger, Peter, Deng, Mario, Braun, Martin, Perner, Sven, Smith, Richard JH, Andorf, Janeen L, Huang, Jian, Ryckman, Kelli, Sheffield, Val C, Stone, Edwin M, Bair, Thomas, Black-Ziegelbein, E Ann, Braun, Terry A, Darbro, Benjamin, DeLuca, Adam P, Kolbe, Diana L, Scheetz, Todd E, Shearer, Aiden E, Sompallae, Rama, Wang, Kai, Bassuk, Alexander G, Edens, Erik, Mathews, Katherine, Moore, Steven A, Shchelochkov, Oleg A, Trapane, Pamela, Bossler, Aaron, Campbell, Colleen A, Heusel, Jonathan W, Kwitek, Anne, Maga, Tara, Panzer, Karin, Wassink, Thomas, Van Daele, Douglas, Azaiez, Hela, Booth, Kevin, Meyer, Nic, Segal, Michael M, Williams, Marc S, Tromp, Gerard, White, Peter, Corsmeier, Donald, Fitzgerald-Butt, Sara, Herman, Gail, Lamb-Thrush, Devon, McBride, Kim L, Newsom, David, Pierson, Christopher R, Rakowsky, Alexander T, Maver, Aleš, Lovrečić, Luca, Palandačić, Anja, Peterlin, Borut, Torkamani, Ali, Wedell, Anna, Huss, Mikael, Alexeyenko, Andrey, Lindvall, Jessica M, Magnusson, Måns, Nilsson, Daniel, Stranneheim, Henrik, Taylan, Fulya, Gilissen, Christian, Hoischen, Alexander, van Bon, Bregje, Yntema, Helger, Nelen, Marcel, Zhang, Weidong, Sager, Jason, Zhang, Lu, Blair, Kathryn, Kural, Deniz, Cariaso, Michael, Lennon, Greg G, Javed, Asif, Agrawal, Saloni, Ng, Pauline C, Sandhu, Komal S, Krishna, Shuba, Veeramachaneni, Vamsi, Isakov, Ofer, Halperin, Eran, Friedman, Eitan, Shomron, Noam, Glusman, Gustavo, Roach, Jared C, Caballero, Juan, Cox, Hannah C, Mauldin, Denise, Ament, Seth A, Rowen, Lee, Richards, Daniel R, Lucas, F Anthony San, Gonzalez-Garay, Manuel L, Caskey, C Thomas, Bai, Yu, Huang, Ying, Fang, Fang, Zhang, Yan, Wang, Zhengyuan, Barrera, Jorge, Garcia-Lobo, Juan M, González-Lamuño, Domingo, Llorca, Javier, Rodriguez, Maria C, Varela, Ignacio, Reese, Martin G, De La Vega, Francisco M, Kiruluta, Edward, Cargill, Michele, Hart, Reece K, Sorenson, Jon M, Lyon, Gholson J, Stevenson, David A, Bray, Bruce E, Moore, Barry M, Eilbeck, Karen, Yandell, Mark, Zhao, Hongyu, Hou, Lin, Chen, Xiaowei, Yan, Xiting, Chen, Mengjie, Li, Cong, Yang, Can, Gunel, Murat, Li, Peining, Kong, Yong, Alexander, Austin C, Albertyn, Zayed I, Boycott, Kym M, Bulman, Dennis E, Gordon, Paul MK, Innes, A Micheil, Knoppers, Bartha M, Majewski, Jacek, Marshall, Christian R, Parboosingh, Jillian S, Sawyer, Sarah L, Samuels, Mark E, Schwartzentruber, Jeremy, Kohane, Isaac S, Margulies, David M
Publicado 2014