Deriving time-concordant event cascades from gene expression data: A case study for Drug-Induced Liver Injury (DILI)

por Liu, Anika, Han, Namshik, Munoz-Muriedas, Jordi, Bender, Andreas
Publicado 2022

From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL

por Liu, Anika, Trairatphisan, Panuwat, Gjerga, Enio, Didangelos, Athanasios, Barratt, Jonathan, Saez-Rodriguez, Julio
Publicado 2019

MAVEN: compound mechanism of action analysis and visualisation using transcriptomics and compound structure data in R/Shiny

por Hosseini-Gerami, Layla, Hernansaiz Ballesteros, Rosa, Liu, Anika, Broughton, Howard, Collier, David Andrew, Bender, Andreas
Publicado 2023

Prediction and mechanistic analysis of drug-induced liver injury (DILI) based on chemical structure

por Liu, Anika, Walter, Moritz, Wright, Peter, Bartosik, Aleksandra, Dolciami, Daniela, Elbasir, Abdurrahman, Yang, Hongbin, Bender, Andreas
Publicado 2021

DILI( C ): An AI-Based Classifier to Search for Drug-Induced Liver Injury Literature

por Rathee, Sanjay, MacMahon, Meabh, Liu, Anika, Katritsis, Nicholas M., Youssef, Gehad, Hwang, Woochang, Wollman, Lilly, Han, Namshik
Publicado 2022

dialogi: Utilising NLP With Chemical and Disease Similarities to Drive the Identification of Drug-Induced Liver Injury Literature

por Katritsis, Nicholas M., Liu, Anika, Youssef, Gehad, Rathee, Sanjay, MacMahon, Méabh, Hwang, Woochang, Wollman, Lilly, Han, Namshik
Publicado 2022

Identification of SARS-CoV-2–induced pathways reveals drug repurposing strategies

por Han, Namshik, Hwang, Woochang, Tzelepis, Konstantinos, Schmerer, Patrick, Yankova, Eliza, MacMahon, Méabh, Lei, Winnie, M. Katritsis, Nicholas, Liu, Anika, Felgenhauer, Ulrike, Schuldt, Alison, Harris, Rebecca, Chapman, Kathryn, McCaughan, Frank, Weber, Friedemann, Kouzarides, Tony
Publicado 2021