New Insight into Mechanisms of Protein Adaptation to High Temperatures: A Comparative Molecular Dynamics Simulation Study of Thermophilic and Mesophilic Subtilisin-Like Serine Prot...

por Sang, Peng, Liu, Shu-Qun, Yang, Li-Quan
Publicado 2020

Methylation-driven model for analysis of dinucleotide evolution in genomes

por Sun, Jian-Hong, Ai, Shi-Meng, Liu, Shu-Qun
Publicado 2020

Recombination facilitates neofunctionalization of duplicate genes via originalization

por Xue, Cheng, Huang, Ren, Liu, Shu-Qun, Fu, Yun-Xin
Publicado 2010

Efficient Estimation of Mutation Rates during Individual Development by Minimization of Chi-Square

por Ai, Shi-Meng, Gao, Jian-Jun, Liu, Shu-Qun, Fu, Yun-Xin
Publicado 2015

Effects of CD4 Binding on Conformational Dynamics, Molecular Motions, and Thermodynamics of HIV-1 gp120

por Li, Yi, Deng, Lei, Yang, Li-Quan, Sang, Peng, Liu, Shu-Qun
Publicado 2019

The Energetic Origin of Different Catalytic Activities in Temperature-Adapted Trypsins

por Xia, Yuan-Ling, Li, Yong-Ping, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2020

Insight Derived from Molecular Dynamics Simulations into Molecular Motions, Thermodynamics and Kinetics of HIV-1 gp120

por Sang, Peng, Yang, Li-Quan, Ji, Xing-Lai, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2014

Characterizing structural features of cuticle-degrading proteases from fungi by molecular modeling

por Liu, Shu-Qun, Meng, Zhao-Hui, Yang, Jin-Kui, Fu, Yun-Xin, Zhang, Ke-Qin
Publicado 2007

Exploring the Cold-Adaptation Mechanism of Serine Hydroxymethyltransferase by Comparative Molecular Dynamics Simulations

por Zhang, Zhi-Bi, Xia, Yuan-Ling, Dong, Guang-Heng, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2021

A Deep Learning Approach for Predicting Antigenic Variation of Influenza A H3N2

por Xia, Yuan-Ling, Li, Weihua, Li, Yongping, Ji, Xing-Lai, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2021

Mechanistic Origin of Different Binding Affinities of SARS-CoV and SARS-CoV-2 Spike RBDs to Human ACE2

por Zhang, Zhi-Bi, Xia, Yuan-Ling, Shen, Jian-Xin, Du, Wen-Wen, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2022

Protein dynamics and motions in relation to their functions: several case studies and the underlying mechanisms

por Yang, Li-Quan, Sang, Peng, Tao, Yan, Fu, Yun-Xin, Zhang, Ke-Qin, Xie, Yue-Hui, Liu, Shu-Qun
Publicado 2013

Fast cross-linking by DOPA2 promotes the capturing of a stereospecific protein complex over nonspecific encounter complexes

por Wang, Jian-Hua, Gong, Zhou, Dong, Xu, Liu, Shu-Qun, Tang, Yu-Liang, Lei, Xiaoguang, Tang, Chun, Dong, Meng-Qiu
Publicado 2022

Insights into Protein–Ligand Interactions: Mechanisms, Models, and Methods

por Du, Xing, Li, Yi, Xia, Yuan-Ling, Ai, Shi-Meng, Liang, Jing, Sang, Peng, Ji, Xing-Lai, Liu, Shu-Qun
Publicado 2016

Comparison of periarticular anesthesia with liposomal bupivacaine with femoral nerve block for pain control after total knee arthroplasty: A PRISMA-compliant meta-analysis

por Liu, Shu-qun, Chen, Xiang, Yu, Chen-chen, Weng, Cheng-wei, Wu, Yan-qin, Xiong, Jun-cheng, Xu, Shi-hao
Publicado 2017

Identification of and Mechanistic Insights into SARS-CoV-2 Main Protease Non-Covalent Inhibitors: An In-Silico Study

por Shen, Jian-Xin, Du, Wen-Wen, Xia, Yuan-Ling, Zhang, Zhi-Bi, Yu, Ze-Fen, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2023

Effect of the Solvent Temperatures on Dynamics of Serine Protease Proteinase K

por Sang, Peng, Yang, Qiong, Du, Xing, Yang, Nan, Yang, Li-Quan, Ji, Xing-Lai, Fu, Yun-Xin, Meng, Zhao-Hui, Liu, Shu-Qun
Publicado 2016

Insights into the molecular mechanism underlying CD4-dependency and neutralization sensitivity of HIV-1: a comparative molecular dynamics study on gp120s from isolates with differe...

por Li, Yi, Deng, Lei, Ai, Shi-Meng, Sang, Peng, Yang, Jing, Xia, Yuan-Lin, Zhang, Zhi-Bi, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2018

Insights into the role of electrostatics in temperature adaptation: a comparative study of psychrophilic, mesophilic, and thermophilic subtilisin-like serine proteases

por Xia, Yuan-Ling, Sun, Jian-Hong, Ai, Shi-Meng, Li, Yi, Du, Xing, Sang, Peng, Yang, Li-Quan, Fu, Yun-Xin, Liu, Shu-Qun
Publicado 2018

Characterization of protein unfolding by fast cross-linking mass spectrometry using di-ortho-phthalaldehyde cross-linkers

por Wang, Jian-Hua, Tang, Yu-Liang, Gong, Zhou, Jain, Rohit, Xiao, Fan, Zhou, Yu, Tan, Dan, Li, Qiang, Huang, Niu, Liu, Shu-Qun, Ye, Keqiong, Tang, Chun, Dong, Meng-Qiu, Lei, Xiaoguang
Publicado 2022