Tuning strand displacement kinetics enables programmable ZTP riboswitch dynamic range in vivo

por Bushhouse, David Z, Lucks, Julius B
Publicado 2023

A modular strategy for engineering orthogonal chimeric RNA transcription regulators

por Takahashi, Melissa K., Lucks, Julius B.
Publicado 2013

Achieving large dynamic range control of gene expression with a compact RNA transcription–translation regulator

por Westbrook, Alexandra M., Lucks, Julius B.
Publicado 2017

Evolution, ecology and the engineered organism: lessons for synthetic biology

por Skerker, Jeffrey M, Lucks, Julius B, Arkin, Adam P
Publicado 2009

Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq

por Watters, Kyle E., Abbott, Timothy R., Lucks, Julius B.
Publicado 2016

Computational design of small transcription activating RNAs for versatile and dynamic gene regulation

por Chappell, James, Westbrook, Alexandra, Verosloff, Matthew, Lucks, Julius B.
Publicado 2017

SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing

por Loughrey, David, Watters, Kyle E., Settle, Alexander H., Lucks, Julius B.
Publicado 2014

DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data

por Xue, Albert Y, Yu, Angela M, Lucks, Julius B, Bagheri, Neda
Publicado 2019

Robust and tunable performance of a cell-free biosensor encapsulated in lipid vesicles

por Boyd, Margrethe A., Thavarajah, Walter, Lucks, Julius B., Kamat, Neha P.
Publicado 2023

Genome Landscapes and Bacteriophage Codon Usage

por Lucks, Julius B., Nelson, David R., Kudla, Grzegorz R., Plotkin, Joshua B.
Publicado 2008

Programming cell-free biosensors with DNA strand displacement circuits

por Jung, Jaeyoung K., Archuleta, Chloé M., Alam, Khalid K., Lucks, Julius B.
Publicado 2022

Distributed biotin–streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

por Strobel, Eric J., Watters, Kyle E., Nedialkov, Yuri, Artsimovitch, Irina, Lucks, Julius B.
Publicado 2017

Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals

por Qi, Lei, Lucks, Julius B., Liu, Chang C., Mutalik, Vivek K., Arkin, Adam P.
Publicado 2012

Cotranscriptional Folding of a Riboswitch at Nucleotide Resolution

por Watters, Kyle E., Strobel, Eric J., Yu, Angela M, Lis, John T., Lucks, Julius B.
Publicado 2016

A ligand gated strand displacement mechanism for ZTP riboswitch transcription control

por Strobel, Eric J., Cheng, Luyi, Berman, Katherine E., Carlson, Paul D., Lucks, Julius B.
Publicado 2019

Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements

por Watters, Kyle E, Choudhary, Krishna, Aviran, Sharon, Lucks, Julius B, Perry, Keith L, Thompson, Jeremy R
Publicado 2018

Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch

por Cheng, Luyi, White, Elise N, Brandt, Naomi L, Yu, Angela M, Chen, Alan A, Lucks, Julius B
Publicado 2022

The accuracy and usability of point-of-use fluoride biosensors in rural Kenya

por Thavarajah, Walter, Owuor, Patrick Mbullo, Awuor, Diana Ross, Kiprotich, Karlmax, Aggarwal, Rahul, Lucks, Julius B., Young, Sera L.
Publicado 2023

Using in-cell SHAPE-Seq and simulations to probe structure–function design principles of RNA transcriptional regulators

por Takahashi, Melissa K., Watters, Kyle E., Gasper, Paul M., Abbott, Timothy R., Carlson, Paul D., Chen, Alan A., Lucks, Julius B.
Publicado 2016

Zur and zinc increase expression of E. coli ribosomal protein L31 through RNA-mediated repression of the repressor L31p

por Rasmussen, Rebecca A, Wang, Suning, Camarillo, Jeannie M, Sosnowski, Victoria, Cho, Byoung-Kyu, Goo, Young Ah, Lucks, Julius B, O’Halloran, Thomas V
Publicado 2022