DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning

por Lugagne, Jean-Baptiste, Lin, Haonan, Dunlop, Mary J.
Publicado 2020

Reunion Island, a sentinel territory for antimicrobial-resistant bacteria surveillance in the South-Western Indian Ocean: a retrospective survey using hospitalized patient screenin...

por Gay, Noellie, Lugagne, Nathalie, Miltgen, Guillaume, Belmonte, Olivier, Cardinale, Eric
Publicado 2020

DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics

por O’Connor, Owen M., Alnahhas, Razan N., Lugagne, Jean-Baptiste, Dunlop, Mary J.
Publicado 2022

Balancing a genetic toggle switch by real-time feedback control and periodic forcing

por Lugagne, Jean-Baptiste, Sosa Carrillo, Sebastián, Kirch, Melanie, Köhler, Agnes, Batt, Gregory, Hersen, Pascal
Publicado 2017

Dynamic gene expression and growth underlie cell-to-cell heterogeneity in Escherichia coli stress response

por Sampaio, Nadia M. V., Blassick, Caroline M., Andreani, Virgile, Lugagne, Jean-Baptiste, Dunlop, Mary J.
Publicado 2022

Derivation and validation of a simple score to predict the presence of bacteria requiring carbapenem treatment in ICU-acquired bloodstream infection and pneumonia: CarbaSCORE

por Teysseyre, Laura, Ferdynus, Cyril, Miltgen, Guillaume, Lair, Thomas, Aujoulat, Thomas, Lugagne, Nathalie, Allou, Nicolas, Allyn, Jérôme
Publicado 2019

Identification of individual cells from z-stacks of bright-field microscopy images

por Lugagne, Jean-Baptiste, Jain, Srajan, Ivanovitch, Pierre, Ben Meriem, Zacchary, Vulin, Clément, Fracassi, Chiara, Batt, Gregory, Hersen, Pascal
Publicado 2018

Longitudinal Single‐Cell Imaging of Engineered Strains with Stimulated Raman Scattering to Characterize Heterogeneity in Fatty Acid Production

por Tague, Nathan, Lin, Haonan, Lugagne, Jean‐Baptiste, O'Connor, Owen M., Burman, Deeya, Wong, Wilson W., Cheng, Ji‐Xin, Dunlop, Mary J.
Publicado 2023

Cell grazing and Haemonchus contortus control in sheep: lessons from a two-year study in temperate Western Europe

por Ruiz-Huidobro, C., Sagot, L., Lugagne, S., Huang, Y., Milhes, M., Bordes, L., Prévot, F., Grisez, C., Gautier, D., Valadier, C., Sautier, M., Jacquiet, P.
Publicado 2019

Nosocomial cluster of carbapenemase-producing Enterobacter cloacae in an intensive care unit dedicated COVID-19

por Miltgen, Guillaume, Garrigos, Thomas, Cholley, Pascal, Deleume, Marine, Allou, Nicolas, Allyn, Jérôme, Wilkinson, David A., Lugagne, Nathalie, Belmonte, Olivier, Bertrand, Xavier, Hocquet, Didier, Mavingui, Patrick
Publicado 2021

Microsecond fingerprint stimulated Raman spectroscopic imaging by ultrafast tuning and spatial-spectral learning

por Lin, Haonan, Lee, Hyeon Jeong, Tague, Nathan, Lugagne, Jean-Baptiste, Zong, Cheng, Deng, Fengyuan, Shin, Jonghyeon, Tian, Lei, Wong, Wilson, Dunlop, Mary J., Cheng, Ji-Xin
Publicado 2021

Carbapenemase-producing Enterobacteriaceae circulating in the Reunion Island, a French territory in the Southwest Indian Ocean

por Miltgen, Guillaume, Cholley, Pascal, Martak, Daniel, Thouverez, Michelle, Seraphin, Paul, Leclaire, Alexandre, Traversier, Nicolas, Roquebert, Bénédicte, Jaffar-Bandjee, Marie-Christine, Lugagne, Nathalie, Cimon, Céline Ben, Ramiandrisoa, Mahery, Picot, Sandrine, Lignereux, Anne, Masson, Geoffrey, Allyn, Jérôme, Allou, Nicolas, Mavingui, Patrick, Belmonte, Olivier, Bertrand, Xavier, Hocquet, Didier
Publicado 2020