Noise reduction in single time frame optical DNA maps

por Torche, Paola C., Müller, Vilhelm, Westerlund, Fredrik, Ambjörnsson, Tobias
Publicado 2017

Enzyme-free optical DNA mapping of the human genome using competitive binding

por Müller, Vilhelm, Dvirnas, Albertas, Andersson, John, Singh, Vandana, KK, Sriram, Johansson, Pegah, Ebenstein, Yuval, Ambjörnsson, Tobias, Westerlund, Fredrik
Publicado 2019

Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

por Dvirnas, Albertas, Stewart, Callum, Müller, Vilhelm, Bikkarolla, Santosh Kumar, Frykholm, Karolin, Sandegren, Linus, Kristiansson, Erik, Westerlund, Fredrik, Ambjörnsson, Tobias
Publicado 2021

Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping

por Müller, Vilhelm, Rajer, Fredrika, Frykholm, Karolin, Nyberg, Lena K., Quaderi, Saair, Fritzsche, Joachim, Kristiansson, Erik, Ambjörnsson, Tobias, Sandegren, Linus, Westerlund, Fredrik
Publicado 2016

Identification of pathogenic bacteria in complex samples using a smartphone based fluorescence microscope

por Müller, Vilhelm, Sousa, José M., Ceylan Koydemir, Hatice, Veli, Muhammed, Tseng, Derek, Cerqueira, Laura, Ozcan, Aydogan, Azevedo, Nuno F., Westerlund, Fredrik
Publicado 2018

Cultivation-Free Typing of Bacteria Using Optical DNA Mapping

por Müller, Vilhelm, Nyblom, My, Johnning, Anna, Wrande, Marie, Dvirnas, Albertas, KK, Sriram, Giske, Christian G., Ambjörnsson, Tobias, Sandegren, Linus, Kristiansson, Erik, Westerlund, Fredrik
Publicado 2020

The resistomes of six carbapenem-resistant pathogens – a critical genotype–phenotype analysis

por Johnning, Anna, Karami, Nahid, Tång Hallbäck, Erika, Müller, Vilhelm, Nyberg, Lena, Buongermino Pereira, Mariana, Stewart, Callum, Ambjörnsson, Tobias, Westerlund, Fredrik, Adlerberth, Ingegerd, Kristiansson, Erik
Publicado 2018

Facilitated sequence assembly using densely labeled optical DNA barcodes: A combinatorial auction approach

por Dvirnas, Albertas, Pichler, Christoffer, Stewart, Callum L., Quaderi, Saair, Nyberg, Lena K., Müller, Vilhelm, Kumar Bikkarolla, Santosh, Kristiansson, Erik, Sandegren, Linus, Westerlund, Fredrik, Ambjörnsson, Tobias
Publicado 2018

Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak

por Bikkarolla, Santosh K., Nordberg, Viveka, Rajer, Fredrika, Müller, Vilhelm, Kabir, Muhammad Humaun, KK, Sriram, Dvirnas, Albertas, Ambjörnsson, Tobias, Giske, Christian G., Navér, Lars, Sandegren, Linus, Westerlund, Fredrik
Publicado 2019

Strain-level bacterial typing directly from patient samples using optical DNA mapping

por Nyblom, My, Johnning, Anna, Frykholm, Karolin, Wrande, Marie, Müller, Vilhelm, Goyal, Gaurav, Robertsson, Miriam, Dvirnas, Albertas, Sewunet, Tsegaye, KK, Sriram, Ambjörnsson, Tobias, Giske, Christian G., Sandegren, Linus, Kristiansson, Erik, Westerlund, Fredrik
Publicado 2023

Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules

por Nyberg, Lena K., Quaderi, Saair, Emilsson, Gustav, Karami, Nahid, Lagerstedt, Erik, Müller, Vilhelm, Noble, Charleston, Hammarberg, Susanna, Nilsson, Adam N., Sjöberg, Fei, Fritzsche, Joachim, Kristiansson, Erik, Sandegren, Linus, Ambjörnsson, Tobias, Westerlund, Fredrik
Publicado 2016

Corrigendum: Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules

por Nyberg, Lena K., Quaderi, Saair, Emilsson, Gustav, Karami, Nahid, Lagerstedt, Erik, Müller, Vilhelm, Noble, Charleston, Hammarberg, Susanna, Nilsson, Adam N., Sjöberg, Fei, Fritzsche, Joachim, Kristiansson, Erik, Sandegren, Linus, Ambjörnsson, Tobias, Westerlund, Fredrik
Publicado 2017