Profile-Wise Analysis: A profile likelihood-based workflow for identifiability analysis, estimation, and prediction with mechanistic mathematical models

por Simpson, Matthew J., Maclaren, Oliver J.
Publicado 2023

Modelling the dynamics of infection, waning of immunity and re-infection with the Omicron variant of SARS-CoV-2 in Aotearoa New Zealand

por Vattiatio, Giorgia, Lustig, Audrey, Maclaren, Oliver J., Plank, Michael J.
Publicado 2022

Where next for the reproducibility agenda in computational biology?

por Lewis, Joanna, Breeze, Charles E., Charlesworth, Jane, Maclaren, Oliver J., Cooper, Jonathan
Publicado 2016

Likelihood-based estimation and prediction for a measles outbreak in Samoa

por Wu, David, Petousis-Harris, Helen, Paynter, Janine, Suresh, Vinod, Maclaren, Oliver J.
Publicado 2023

Modelling the impact of the Omicron BA.5 subvariant in New Zealand

por Lustig, Audrey, Vattiato, Giorgia, Maclaren, Oliver, Watson, Leighton M., Datta, Samik, Plank, Michael J.
Publicado 2023

An assessment of the potential impact of the Omicron variant of SARS-CoV-2 in Aotearoa New Zealand

por Vattiato, Giorgia, Maclaren, Oliver, Lustig, Audrey, Binny, Rachelle N., Hendy, Shaun C., Plank, Michael J.
Publicado 2022

Using mechanistic model-based inference to understand and project epidemic dynamics with time-varying contact and vaccination rates

por Plank, Michael J., Hendy, Shaun C., Binny, Rachelle N., Vattiato, Giorgia, Lustig, Audrey, Maclaren, Oliver J.
Publicado 2022

Profile likelihood analysis for a stochastic model of diffusion in heterogeneous media

por Simpson, Matthew J., Browning, Alexander P., Drovandi, Christopher, Carr, Elliot J., Maclaren, Oliver J., Baker, Ruth E.
Publicado 2021

Real-time estimation of the effective reproduction number of SARS-CoV-2 in Aotearoa New Zealand

por Binny, Rachelle N., Lustig, Audrey, Hendy, Shaun C., Maclaren, Oliver J., Ridings, Kannan M., Vattiato, Giorgia, Plank, Michael J.
Publicado 2022

Modelling Aotearoa New Zealand's COVID-19 protection framework and the transition away from the elimination strategy

por Vattiato, Giorgia, Lustig, Audrey, Maclaren, Oliver, Binny, Rachelle N., Hendy, Shaun C., Harvey, Emily, O'Neale, Dion, Plank, Michael J.
Publicado 2023

Computationally efficient framework for diagnosing, understanding and predicting biphasic population growth

por Murphy, Ryan J., Maclaren, Oliver J., Calabrese, Alivia R., Thomas, Patrick B., Warne, David J., Williams, Elizabeth D., Simpson, Matthew J.
Publicado 2022

A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium

por Maclaren, Oliver J., Parker, Aimée, Pin, Carmen, Carding, Simon R., Watson, Alastair J. M., Fletcher, Alexander G., Byrne, Helen M., Maini, Philip K.
Publicado 2017

Cell proliferation within small intestinal crypts is the principal driving force for cell migration on villi

por Parker, Aimee, Maclaren, Oliver J., Fletcher, Alexander G., Muraro, Daniele, Kreuzaler, Peter A., Byrne, Helen M., Maini, Philip K., Watson, Alastair J. M., Pin, Carmen
Publicado 2017

Sensitivity of Reverse Transcription Polymerase Chain Reaction Tests for Severe Acute Respiratory Syndrome Coronavirus 2 Through Time

por Binny, Rachelle N, Priest, Patricia, French, Nigel P, Parry, Matthew, Lustig, Audrey, Hendy, Shaun C, Maclaren, Oliver J, Ridings, Kannan M, Steyn, Nicholas, Vattiato, Giorgia, Plank, Michael J
Publicado 2022