Gene flow in microbial communities could explain unexpected patterns of synonymous variation in the Escherichia coli core genome

por Maddamsetti, Rohan
Publicado 2016

Selection Maintains Protein Interactome Resilience in the Long-Term Evolution Experiment with Escherichia coli

por Maddamsetti, Rohan
Publicado 2021

Universal Constraints on Protein Evolution in the Long-Term Evolution Experiment with Escherichia coli

por Maddamsetti, Rohan
Publicado 2021

Idiosyncratic Purifying Selection on Metabolic Enzymes in the Long-Term Evolution Experiment with Escherichia coli

por Maddamsetti, Rohan
Publicado 2022

Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection

por Maddamsetti, Rohan, Lenski, Richard E.
Publicado 2018

Divergent Evolution of Mutation Rates and Biases in the Long-Term Evolution Experiment with Escherichia coli

por Maddamsetti, Rohan, Grant, Nkrumah A
Publicado 2020

Discovery of positive and purifying selection in metagenomic time series of hypermutator microbial populations

por Maddamsetti, Rohan, Grant, Nkrumah A.
Publicado 2022

Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences

por Green, Anna G., Elhabashy, Hadeer, Brock, Kelly P., Maddamsetti, Rohan, Kohlbacher, Oliver, Marks, Debora S.
Publicado 2021

Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment

por Maddamsetti, Rohan, Hatcher, Philip J., Cruveiller, Stéphane, Médigue, Claudine, Barrick, Jeffrey E., Lenski, Richard E.
Publicado 2015

Gain‐of‐function experiments with bacteriophage lambda uncover residues under diversifying selection in nature

por Maddamsetti, Rohan, Johnson, Daniel T., Spielman, Stephanie J., Petrie, Katherine L., Marks, Debora S., Meyer, Justin R.
Publicado 2018

Core Genes Evolve Rapidly in the Long-Term Evolution Experiment with Escherichia coli

por Maddamsetti, Rohan, Hatcher, Philip J., Green, Anna G., Williams, Barry L., Marks, Debora S., Lenski, Richard E.
Publicado 2017

Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment

por Blount, Zachary D, Maddamsetti, Rohan, Grant, Nkrumah A, Ahmed, Sumaya T, Jagdish, Tanush, Baxter, Jessica A, Sommerfeld, Brooke A, Tillman, Alice, Moore, Jeremy, Slonczewski, Joan L, Barrick, Jeffrey E, Lenski, Richard E
Publicado 2020

Haplotype-Phased Synthetic Long Reads from Short-Read Sequencing

por Stapleton, James A., Kim, Jeongwoon, Hamilton, John P., Wu, Ming, Irber, Luiz C., Maddamsetti, Rohan, Briney, Bryan, Newton, Linsey, Burton, Dennis R., Brown, C. Titus, Chan, Christina, Buell, C. Robin, Whitehead, Timothy A.
Publicado 2016

Sustained fitness gains and variability in fitness trajectories in the long-term evolution experiment with Escherichia coli

por Lenski, Richard E., Wiser, Michael J., Ribeck, Noah, Blount, Zachary D., Nahum, Joshua R., Morris, J. Jeffrey, Zaman, Luis, Turner, Caroline B., Wade, Brian D., Maddamsetti, Rohan, Burmeister, Alita R., Baird, Elizabeth J., Bundy, Jay, Grant, Nkrumah A., Card, Kyle J., Rowles, Maia, Weatherspoon, Kiyana, Papoulis, Spiridon E., Sullivan, Rachel, Clark, Colleen, Mulka, Joseph S., Hajela, Neerja
Publicado 2015