Whole-genome scanning reveals environmental selection mechanisms that shape diversity in populations of the epipelagic diatom Chaetoceros

por Nef, Charlotte, Madoui, Mohammed-Amin, Pelletier, Éric, Bowler, Chris
Publicado 2022

metaVaR: Introducing metavariant species models for reference-free metagenomic-based population genomics

por Laso-Jadart, Romuald, Ambroise, Christophe, Peterlongo, Pierre, Madoui, Mohammed-Amin
Publicado 2020

Holistic view of the seascape dynamics and environment impact on macro-scale genetic connectivity of marine plankton populations

por Laso-Jadart, Romuald, O’Malley, Michael, Sykulski, Adam M., Ambroise, Christophe, Madoui, Mohammed-Amin
Publicado 2023

Chitin distribution in the Oithona digestive and reproductive systems revealed by fluorescence microscopy

por Sugier, Kevin, Vacherie, Benoit, Cornils, Astrid, Wincker, Patrick, Jamet, Jean-Louis, Madoui, Mohammed-Amin
Publicado 2018

MaGuS: a tool for quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data

por Madoui, Mohammed-Amin, Dossat, Carole, d’Agata, Léo, van Oeveren, Jan, van der Vossen, Edwin, Aury, Jean-Marc
Publicado 2016

Genome assembly using Nanopore-guided long and error-free DNA reads

por Madoui, Mohammed-Amin, Engelen, Stefan, Cruaud, Corinne, Belser, Caroline, Bertrand, Laurie, Alberti, Adriana, Lemainque, Arnaud, Wincker, Patrick, Aury, Jean-Marc
Publicado 2015

Performance comparison of four exome capture systems for deep sequencing

por Chilamakuri, Chandra Sekhar Reddy, Lorenz, Susanne, Madoui, Mohammed-Amin, Vodák, Daniel, Sun, Jinchang, Hovig, Eivind, Myklebost, Ola, Meza-Zepeda, Leonardo A
Publicado 2014

Investigating population‐scale allelic differential expression in wild populations of Oithona similis (Cyclopoida, Claus, 1866)

por Laso‐Jadart, Romuald, Sugier, Kevin, Petit, Emmanuelle, Labadie, Karine, Peterlongo, Pierre, Ambroise, Christophe, Wincker, Patrick, Jamet, Jean‐Louis, Madoui, Mohammed‐Amin
Publicado 2020

Genomic differentiation of three pico‐phytoplankton species in the Mediterranean Sea

por Da Silva, Ophélie, Ayata, Sakina‐Dorothée, Ser‐Giacomi, Enrico, Leconte, Jade, Pelletier, Eric, Fauvelot, Cécile, Madoui, Mohammed‐Amin, Guidi, Lionel, Lombard, Fabien, Bittner, Lucie
Publicado 2022

Transposition favors the generation of large effect mutations that may facilitate rapid adaption

por Quadrana, Leandro, Etcheverry, Mathilde, Gilly, Arthur, Caillieux, Erwann, Madoui, Mohammed-Amin, Guy, Julie, Bortolini Silveira, Amanda, Engelen, Stefan, Baillet, Victoire, Wincker, Patrick, Aury, Jean-Marc, Colot, Vincent
Publicado 2019

Chromosome-scale assembly of the yellow mealworm genome

por Eleftheriou, Evangelia, Aury, Jean-Marc, Vacherie, Benoît, Istace, Benjamin, Belser, Caroline, Noel, Benjamin, Moret, Yannick, Rigaud, Thierry, Berro, Fabrice, Gasparian, Sona, Labadie-Bretheau, Karine, Lefebvre, Thomas, Madoui, Mohammed-Amin
Publicado 2022

Development of a Sequence-Based Reference Physical Map of Pea (Pisum sativum L.)

por Gali, Krishna Kishore, Tar’an, Bunyamin, Madoui, Mohammed-Amin, van der Vossen, Edwin, van Oeveren, Jan, Labadie, Karine, Berges, Helene, Bendahmane, Abdelhafid, Lachagari, Reddy V. B., Burstin, Judith, Warkentin, Tom
Publicado 2019

Male Differentiation in the Marine Copepod Oithona nana Reveals the Development of a New Nervous Ganglion and Lin12-Notch-Repeat Protein-Associated Proteolysis

por Sugier, Kevin, Laso-Jadart, Romuald, Vacherie, Benoît, Käfer, Jos, Bertrand, Laurie, Labadie, Karine, Martins, Nathalie, Orvain, Céline, Petit, Emmanuelle, Wincker, Patrick, Jamet, Jean-Louis, Alberti, Adriana, Madoui, Mohammed-Amin
Publicado 2021

TE-Tracker: systematic identification of transposition events through whole-genome resequencing

por Gilly, Arthur, Etcheverry, Mathilde, Madoui, Mohammed-Amin, Guy, Julie, Quadrana, Leandro, Alberti, Adriana, Martin, Antoine, Heitkam, Tony, Engelen, Stefan, Labadie, Karine, Le Pen, Jeremie, Wincker, Patrick, Colot, Vincent, Aury, Jean-Marc
Publicado 2014

AI-based mobile application to fight antibiotic resistance

por Pascucci, Marco, Royer, Guilhem, Adamek, Jakub, Asmar, Mai Al, Aristizabal, David, Blanche, Laetitia, Bezzarga, Amine, Boniface-Chang, Guillaume, Brunner, Alex, Curel, Christian, Dulac-Arnold, Gabriel, Fakhri, Rasheed M., Malou, Nada, Nordon, Clara, Runge, Vincent, Samson, Franck, Sebastian, Ellen, Soukieh, Dena, Vert, Jean-Philippe, Ambroise, Christophe, Madoui, Mohammed-Amin
Publicado 2021

A global ocean atlas of eukaryotic genes

por Carradec, Quentin, Pelletier, Eric, Da Silva, Corinne, Alberti, Adriana, Seeleuthner, Yoann, Blanc-Mathieu, Romain, Lima-Mendez, Gipsi, Rocha, Fabio, Tirichine, Leila, Labadie, Karine, Kirilovsky, Amos, Bertrand, Alexis, Engelen, Stefan, Madoui, Mohammed-Amin, Méheust, Raphaël, Poulain, Julie, Romac, Sarah, Richter, Daniel J., Yoshikawa, Genki, Dimier, Céline, Kandels-Lewis, Stefanie, Picheral, Marc, Searson, Sarah, Jaillon, Olivier, Aury, Jean-Marc, Karsenti, Eric, Sullivan, Matthew B., Sunagawa, Shinichi, Bork, Peer, Not, Fabrice, Hingamp, Pascal, Raes, Jeroen, Guidi, Lionel, Ogata, Hiroyuki, de Vargas, Colomban, Iudicone, Daniele, Bowler, Chris, Wincker, Patrick
Publicado 2018

The Rosa genome provides new insights into the domestication of modern roses

por Raymond, Olivier, Gouzy, Jérôme, Just, Jérémy, Badouin, Hélène, Verdenaud, Marion, Lemainque, Arnaud, Vergne, Philippe, Moja, Sandrine, Choisne, Nathalie, Pont, Caroline, Carrère, Sébastien, Caissard, Jean-Claude, Couloux, Arnaud, Cottret, Ludovic, Aury, Jean-Marc, Szecsi, Judit, Latrasse, David, Madoui, Mohammed-Amin, François, Léa, Fu, Xiaopeng, Yang, Shu-Hua, Dubois, Annick, Piola, Florence, Larrieu, Antoine, Perez, Magali, Labadie, Karine, Perrier, Lauriane, Govetto, Benjamin, Labrousse, Yoan, Villand, Priscilla, Bardoux, Claudia, Boltz, Véronique, Lopez-Roques, Céline, Heitzler, Pascal, Vernoux, Teva, Vandenbussche, Michiel, Quesneville, Hadi, Boualem, Adnane, Bendahmane, Abdelhafid, Liu, Chang, Le Bris, Manuel, Salse, Jérôme, Baudino, Sylvie, Benhamed, Moussa, Wincker, Patrick, Bendahmane, Mohammed
Publicado 2018

Oak genome reveals facets of long lifespan

por Plomion, Christophe, Aury, Jean-Marc, Amselem, Joëlle, Leroy, Thibault, Murat, Florent, Duplessis, Sébastien, Faye, Sébastien, Francillonne, Nicolas, Labadie, Karine, Le Provost, Grégoire, Lesur, Isabelle, Bartholomé, Jérôme, Faivre-Rampant, Patricia, Kohler, Annegret, Leplé, Jean-Charles, Chantret, Nathalie, Chen, Jun, Diévart, Anne, Alaeitabar, Tina, Barbe, Valérie, Belser, Caroline, Bergès, Hélène, Bodénès, Catherine, Bogeat-Triboulot, Marie-Béatrice, Bouffaud, Marie-Lara, Brachi, Benjamin, Chancerel, Emilie, Cohen, David, Couloux, Arnaud, Da Silva, Corinne, Dossat, Carole, Ehrenmann, François, Gaspin, Christine, Grima-Pettenati, Jacqueline, Guichoux, Erwan, Hecker, Arnaud, Herrmann, Sylvie, Hugueney, Philippe, Hummel, Irène, Klopp, Christophe, Lalanne, Céline, Lascoux, Martin, Lasserre, Eric, Lemainque, Arnaud, Desprez-Loustau, Marie-Laure, Luyten, Isabelle, Madoui, Mohammed-Amin, Mangenot, Sophie, Marchal, Clémence, Maumus, Florian, Mercier, Jonathan, Michotey, Célia, Panaud, Olivier, Picault, Nathalie, Rouhier, Nicolas, Rué, Olivier, Rustenholz, Camille, Salin, Franck, Soler, Marçal, Tarkka, Mika, Velt, Amandine, Zanne, Amy E., Martin, Francis, Wincker, Patrick, Quesneville, Hadi, Kremer, Antoine, Salse, Jérôme
Publicado 2018