Automatic quality control of single-cell and single-nucleus RNA-seq using valiDrops

por Kavaliauskaite, Gabija, Madsen, Jesper Grud Skat
Publicado 2023

iRNA-seq: computational method for genome-wide assessment of acute transcriptional regulation from total RNA-seq data

por Madsen, Jesper Grud Skat, Schmidt, Søren Fisker, Larsen, Bjørk Ditlev, Loft, Anne, Nielsen, Ronni, Mandrup, Susanne
Publicado 2015

Acute TNF-induced repression of cell identity genes is mediated by NFκB-directed redistribution of cofactors from super-enhancers

por Schmidt, Søren Fisker, Larsen, Bjørk Ditlev, Loft, Anne, Nielsen, Ronni, Madsen, Jesper Grud Skat, Mandrup, Susanne
Publicado 2015

Integrated analysis of motif activity and gene expression changes of transcription factors

por Madsen, Jesper Grud Skat, Rauch, Alexander, Van Hauwaert, Elvira Laila, Schmidt, Søren Fisker, Winnefeld, Marc, Mandrup, Susanne
Publicado 2018

Isolation of nuclei from mouse white adipose tissues for single-nucleus genomics

por Van Hauwaert, Elvira Laila, Gammelmark, Ellen, Sárvári, Anitta Kinga, Larsen, Lena, Nielsen, Ronni, Madsen, Jesper Grud Skat, Mandrup, Susanne
Publicado 2021

AMPK Profiling in Rodent and Human Pancreatic Beta-Cells under Nutrient-Rich Metabolic Stress

por Brun, Thierry, Jiménez-Sánchez, Cecilia, Madsen, Jesper Grud Skat, Hadadi, Noushin, Duhamel, Dominique, Bartley, Clarissa, Oberhauser, Lucie, Trajkovski, Mirko, Mandrup, Susanne, Maechler, Pierre
Publicado 2020

Browning of human adipocytes requires KLF11 and reprogramming of PPARγ superenhancers

por Loft, Anne, Forss, Isabel, Siersbæk, Majken Storm, Schmidt, Søren Fisker, Larsen, Ann-Sofie Bøgh, Madsen, Jesper Grud Skat, Pisani, Didier F., Nielsen, Ronni, Aagaard, Mads Malik, Mathison, Angela, Neville, Matt J., Urrutia, Raul, Karpe, Fredrik, Amri, Ez-Zoubir, Mandrup, Susanne
Publicado 2015