Widespread Recurrent Evolution of Genomic Features

por Maeso, Ignacio, Roy, Scott William, Irimia, Manuel
Publicado 2012

The medaka mutation tintachina sheds light on the evolution of V-ATPase B subunits in vertebrates

por Müller, Claudia, Maeso, Ignacio, Wittbrodt, Joachim, Martínez-Morales, Juan R.
Publicado 2013

Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

por Royall, Amy H., Maeso, Ignacio, Dunwell, Thomas L., Holland, Peter W. H.
Publicado 2018

Cdx ParaHox genes acquired distinct developmental roles after gene duplication in vertebrate evolution

por Marlétaz, Ferdinand, Maeso, Ignacio, Faas, Laura, Isaacs, Harry V., Holland, Peter W. H.
Publicado 2015

Conserved developmental expression of Fezf in chordates and Drosophila and the origin of the Zona Limitans Intrathalamica (ZLI) brain organizer

por Irimia, Manuel, Piñeiro, Cristina, Maeso, Ignacio, Gómez-Skarmeta, José Luis, Casares, Fernando, Garcia-Fernàndez, Jordi
Publicado 2010

Comparative genomics of the Hedgehog loci in chordates and the origins of Shh regulatory novelties

por Irimia, Manuel, Royo, Jose L., Burguera, Demian, Maeso, Ignacio, Gómez-Skarmeta, José L., Garcia-Fernandez, Jordi
Publicado 2012

4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data

por Irastorza-Azcarate, Ibai, Acemel, Rafael D., Tena, Juan J., Maeso, Ignacio, Gómez-Skarmeta, José Luis, Devos, Damien P.
Publicado 2018

Contrasting 5' and 3' Evolutionary Histories and Frequent Evolutionary Convergence in Meis/hth Gene Structures

por Irimia, Manuel, Maeso, Ignacio, Burguera, Demián, Hidalgo-Sánchez, Matías, Puelles, Luis, Roy, Scott W., Garcia-Fernàndez, Jordi, Ferran, José Luis
Publicado 2011

Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals

por Maeso, Ignacio, Dunwell, Thomas L., Wyatt, Chris D. R., Marlétaz, Ferdinand, Vető, Borbála, Bernal, Juan A., Quah, Shan, Irimia, Manuel, Holland, Peter W. H.
Publicado 2016

Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications

por Touceda-Suárez, María, Kita, Elizabeth M, Acemel, Rafael D, Firbas, Panos N, Magri, Marta S, Naranjo, Silvia, Tena, Juan J, Gómez-Skarmeta, Jose Luis, Maeso, Ignacio, Irimia, Manuel
Publicado 2020

Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints

por Irimia, Manuel, Tena, Juan J., Alexis, Maria S., Fernandez-Miñan, Ana, Maeso, Ignacio, Bogdanović, Ozren, de la Calle-Mustienes, Elisa, Roy, Scott W., Gómez-Skarmeta, José L., Fraser, Hunter B.
Publicado 2012

A conserved Shh cis-regulatory module highlights a common developmental origin of unpaired and paired fins

por Letelier, Joaquín, de la Calle-Mustienes, Elisa, Pieretti, Joyce, Naranjo, Silvia, Maeso, Ignacio, Nakamura, Tetsuya, Pascual-Anaya, Juan, Shubin, Neil, Schneider, Igor, Martinez-Morales, Juan Ramón, Gómez-Skarmeta, José Luis
Publicado 2018

Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain

por Albuixech-Crespo, Beatriz, López-Blanch, Laura, Burguera, Demian, Maeso, Ignacio, Sánchez-Arrones, Luisa, Moreno-Bravo, Juan Antonio, Somorjai, Ildiko, Pascual-Anaya, Juan, Puelles, Eduardo, Bovolenta, Paola, Garcia-Fernàndez, Jordi, Puelles, Luis, Irimia, Manuel, Ferran, José Luis
Publicado 2017

Parallel evolution of amphioxus and vertebrate small-scale gene duplications

por Brasó-Vives, Marina, Marlétaz, Ferdinand, Echchiki, Amina, Mantica, Federica, Acemel, Rafael D., Gómez-Skarmeta, José L., Hartasánchez, Diego A., Le Targa, Lorlane, Pontarotti, Pierre, Tena, Juan J., Maeso, Ignacio, Escriva, Hector, Irimia, Manuel, Robinson-Rechavi, Marc
Publicado 2022

Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings

por Almudi, Isabel, Vizueta, Joel, Wyatt, Christopher D. R., de Mendoza, Alex, Marlétaz, Ferdinand, Firbas, Panos N., Feuda, Roberto, Masiero, Giulio, Medina, Patricia, Alcaina-Caro, Ana, Cruz, Fernando, Gómez-Garrido, Jessica, Gut, Marta, Alioto, Tyler S., Vargas-Chavez, Carlos, Davie, Kristofer, Misof, Bernhard, González, Josefa, Aerts, Stein, Lister, Ryan, Paps, Jordi, Rozas, Julio, Sánchez-Gracia, Alejandro, Irimia, Manuel, Maeso, Ignacio, Casares, Fernando
Publicado 2020

The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

por Schwager, Evelyn E., Sharma, Prashant P., Clarke, Thomas, Leite, Daniel J., Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, Lauren, Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D., Chao, Hsu, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G., Funch, Peter, Garb, Jessica, Gonzalez, Luis B., Gonzalez, Vanessa L., Griffiths-Jones, Sam, Han, Yi, Hayashi, Cheryl, Hilbrant, Maarten, Hughes, Daniel S. T., Janssen, Ralf, Lee, Sandra L., Maeso, Ignacio, Murali, Shwetha C., Muzny, Donna M., Nunes da Fonseca, Rodrigo, Paese, Christian L. B., Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schönauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, John H., Wolff, Carsten, Worley, Kim C., Bucher, Gregor, Gibbs, Richard A., Coddington, Jonathan, Oda, Hiroki, Stanke, Mario, Ayoub, Nadia A., Prpic, Nikola-Michael, Flot, Jean-François, Posnien, Nico, Richards, Stephen, McGregor, Alistair P.
Publicado 2017

Amphioxus functional genomics and the origins of vertebrate gene regulation

por Marlétaz, Ferdinand, Firbas, Panos N., Maeso, Ignacio, Tena, Juan J., Bogdanovic, Ozren, Perry, Malcolm, Wyatt, Christopher D. R., de la Calle-Mustienes, Elisa, Bertrand, Stephanie, Burguera, Demian, Acemel, Rafael D., van Heeringen, Simon J., Naranjo, Silvia, Herrera-Ubeda, Carlos, Skvortsova, Ksenia, Jimenez-Gancedo, Sandra, Aldea, Daniel, Marquez, Yamile, Buono, Lorena, Kozmikova, Iryna, Permanyer, Jon, Louis, Alexandra, Albuixech-Crespo, Beatriz, Le Petillon, Yann, Leon, Anthony, Subirana, Lucie, Balwierz, Piotr J., Duckett, Paul Edward, Farahani, Ensieh, Aury, Jean-Marc, Mangenot, Sophie, Wincker, Patrick, Albalat, Ricard, Benito-Gutiérrez, Èlia, Cañestro, Cristian, Castro, Filipe, D’Aniello, Salvatore, Ferrier, David E. K., Huang, Shengfeng, Laudet, Vincent, Marais, Gabriel A. B., Pontarotti, Pierre, Schubert, Michael, Seitz, Hervé, Somorjai, Ildiko, Takahashi, Tokiharu, Mirabeau, Olivier, Xu, Anlong, Yu, Jr-Kai, Carninci, Piero, Martinez-Morales, Juan Ramon, Crollius, Hugues Roest, Kozmik, Zbynek, Weirauch, Matthew T., Garcia-Fernàndez, Jordi, Lister, Ryan, Lenhard, Boris, Holland, Peter W. H., Escriva, Hector, Gómez-Skarmeta, Jose Luis, Irimia, Manuel
Publicado 2018