Genomic imprinting effects on complex traits in domesticated animal species

por O’Doherty, Alan M., MacHugh, David E., Spillane, Charles, Magee, David A.
Publicado 2015

Polymorphisms in bovine immune genes and their associations with somatic cell count and milk production in dairy cattle

por Beecher, Christine, Daly, Mairead, Childs, Stuart, Berry, Donagh P, Magee, David A, McCarthy, Tommie V, Giblin, Linda
Publicado 2010

Comparative Functional Genomics and the Bovine Macrophage Response to Strains of the Mycobacterium Genus

por Rue-Albrecht, Kévin, Magee, David A., Killick, Kate E., Nalpas, Nicolas C., Gordon, Stephen V., MacHugh, David E.
Publicado 2014

DNA methylation dynamics at imprinted genes during bovine pre-implantation embryo development

por O’Doherty, Alan M, Magee, David A, O’Shea, Lynee C, Forde, Niamh, Beltman, Marijke E, Mamo, Solomon, Fair, Trudee
Publicado 2015

Genome-Wide microRNA Binding Site Variation between Extinct Wild Aurochs and Modern Cattle Identifies Candidate microRNA-Regulated Domestication Genes

por Braud, Martin, Magee, David A., Park, Stephen D. E., Sonstegard, Tad S., Waters, Sinead M., MacHugh, David E., Spillane, Charles
Publicado 2017

Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis

por MacHugh, David E, Taraktsoglou, Maria, Killick, Kate E, Nalpas, Nicolas C, Browne, John A, DE Park, Stephen, Hokamp, Karsten, Gormley, Eamonn, Magee, David A
Publicado 2012

GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

por Rue-Albrecht, Kévin, McGettigan, Paul A., Hernández, Belinda, Nalpas, Nicolas C., Magee, David A., Parnell, Andrew C., Gordon, Stephen V., MacHugh, David E.
Publicado 2016

RNA Sequencing (RNA-Seq) Reveals Extremely Low Levels of Reticulocyte-Derived Globin Gene Transcripts in Peripheral Blood From Horses (Equus caballus) and Cattle (Bos taurus)

por Correia, Carolina N., McLoughlin, Kirsten E., Nalpas, Nicolas C., Magee, David A., Browne, John A., Rue-Albrecht, Kevin, Gordon, Stephen V., MacHugh, David E.
Publicado 2018

DNA sequence polymorphisms in a panel of eight candidate bovine imprinted genes and their association with performance traits in Irish Holstein-Friesian cattle

por Magee, David A, Sikora, Klaudia M, Berkowicz, Erik W, Berry, Donagh P, Howard, Dawn J, Mullen, Michael P, Evans, Ross D, Spillane, Charles, MacHugh, David E
Publicado 2010

DNA sequence polymorphisms within the bovine guanine nucleotide-binding protein Gs subunit alpha (Gsα)-encoding (GNAS) genomic imprinting domain are associated with performance tra...

por Sikora, Klaudia M, Magee, David A, Berkowicz, Erik W, Berry, Donagh P, Howard, Dawn J, Mullen, Michael P, Evans, Ross D, MacHugh, David E, Spillane, Charles
Publicado 2011

Single Nucleotide Polymorphisms in the Insulin-Like Growth Factor 1 (IGF-1) Gene are Associated with Performance in Holstein-Friesian Dairy Cattle

por Mullen, Michael Paul, Berry, Donagh P., Howard, Dawn J., Diskin, Michael G., Lynch, Ciaran O., Giblin, Linda, Kenny, David A., Magee, David A., Meade, Kieran G., Waters, Sinead M.
Publicado 2011

Intragenic sequences in the trophectoderm harbour the greatest proportion of methylation errors in day 17 bovine conceptuses generated using assisted reproductive technologies

por O’Doherty, Alan M., McGettigan, Paul, Irwin, Rachelle E., Magee, David A., Gagne, Dominic, Fournier, Eric, Al-Naib, Abdullah, Sirard, Marc-André, Walsh, Colum P., Robert, Claude, Fair, Trudee
Publicado 2018

Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes

por Killick, Kate E, Browne, John A, Park, Stephen DE, Magee, David A, Martin, Irene, Meade, Kieran G, Gordon, Stephen V, Gormley, Eamonn, O'Farrelly, Cliona, Hokamp, Karsten, MacHugh, David E
Publicado 2011

Genomic Characterisation of the Indigenous Irish Kerry Cattle Breed

por Browett, Sam, McHugo, Gillian, Richardson, Ian W., Magee, David A., Park, Stephen D. E., Fahey, Alan G., Kearney, John F., Correia, Carolina N., Randhawa, Imtiaz A. S., MacHugh, David E.
Publicado 2018

Key Hub and Bottleneck Genes Differentiate the Macrophage Response to Virulent and Attenuated Mycobacterium bovis

por Killick, Kate E., Magee, David A., Park, Stephen D. E., Taraktsoglou, Maria, Browne, John A., Conlon, Kevin M., Nalpas, Nicolas C., Gormley, Eamonn, Gordon, Stephen V., MacHugh, David E., Hokamp, Karsten
Publicado 2014

Analysis of the Bovine Monocyte-Derived Macrophage Response to Mycobacterium avium Subspecies Paratuberculosis Infection Using RNA-seq

por Casey, Maura E., Meade, Kieran G., Nalpas, Nicolas C., Taraktsoglou, Maria, Browne, John A., Killick, Kate E., Park, Stephen D. E., Gormley, Eamonn, Hokamp, Karsten, Magee, David A., MacHugh, David E.
Publicado 2015

Comparative 'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the human and bovine tubercl...

por Malone, Kerri M., Rue-Albrecht, Kévin, Magee, David A., Conlon, Kevin, Schubert, Olga T., Nalpas, Nicolas C., Browne, John A., Smyth, Alicia, Gormley, Eamonn, Aebersold, Ruedi, MacHugh, David E., Gordon, Stephen V.
Publicado 2018

Global Gene Expression and Systems Biology Analysis of Bovine Monocyte-Derived Macrophages in Response to In Vitro Challenge with Mycobacterium bovis

por Magee, David A., Taraktsoglou, Maria, Killick, Kate E., Nalpas, Nicolas C., Browne, John A., Park, Stephen D. E., Conlon, Kevin M., Lynn, David J., Hokamp, Karsten, Gordon, Stephen V., Gormley, Eamonn, MacHugh, David E.
Publicado 2012

RNA sequencing provides exquisite insight into the manipulation of the alveolar macrophage by tubercle bacilli

por Nalpas, Nicolas C., Magee, David A., Conlon, Kevin M., Browne, John A., Healy, Claire, McLoughlin, Kirsten E., Rue-Albrecht, Kévin, McGettigan, Paul A., Killick, Kate E., Gormley, Eamonn, Gordon, Stephen V., MacHugh, David E.
Publicado 2015

RNA-Seq Transcriptome Analysis of Peripheral Blood From Cattle Infected With Mycobacterium bovis Across an Experimental Time Course

por McLoughlin, Kirsten E., Correia, Carolina N., Browne, John A., Magee, David A., Nalpas, Nicolas C., Rue-Albrecht, Kevin, Whelan, Adam O., Villarreal-Ramos, Bernardo, Vordermeier, H. Martin, Gormley, Eamonn, Gordon, Stephen V., MacHugh, David E.
Publicado 2021