Exploiting Oxytricha trifallax nanochromosomes to screen for non-coding RNA genes

por Jung, Seolkyoung, Swart, Estienne C., Minx, Patrick J., Magrini, Vincent, Mardis, Elaine R., Landweber, Laura F., Eddy, Sean R.
Publicado 2011

Gallus GBrowse: a unified genomic database for the chicken

por Schmidt, Carl J., Romanov, Michael, Ryder, Oliver, Magrini, Vincent, Hickenbotham, Matthew, Glasscock, Jarret, McGrath, Sean, Mardis, Elaine, Stein, Lincoln D.
Publicado 2008

Genome Sequence of Enterovirus D68 from St. Louis, Missouri, USA

por Wylie, Kristine M., Wylie, Todd N., Orvedahl, Anthony, Buller, Richard S., Herter, Brandi N., Magrini, Vincent, Wilson, Richard K., Storch, Gregory A.
Publicado 2015

A deletion in the N gene of SARS-CoV-2 may reduce test sensitivity for detection of SARS-CoV-2

por Wang, Huanyu, Jean, Sophonie, Wilson, Sarah A., Lucyshyn, Jocelyn M., McGrath, Sean, Wilson, Richard K., Magrini, Vincent, Leber, Amy L.
Publicado 2022

Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags

por Shin, Heesun, Hirst, Martin, Bainbridge, Matthew N, Magrini, Vincent, Mardis, Elaine, Moerman, Donald G, Marra, Marco A, Baillie, David L, Jones, Steven JM
Publicado 2008

Improving eukaryotic genome annotation using single molecule mRNA sequencing

por Magrini, Vincent, Gao, Xin, Rosa, Bruce A., McGrath, Sean, Zhang, Xu, Hallsworth-Pepin, Kymberlie, Martin, John, Hawdon, John, Wilson, Richard K., Mitreva, Makedonka
Publicado 2018

The Oxytricha trifallax Mitochondrial Genome

por Swart, Estienne C., Nowacki, Mariusz, Shum, Justine, Stiles, Heather, Higgins, Brian P., Doak, Thomas G., Schotanus, Klaas, Magrini, Vincent J., Minx, Patrick, Mardis, Elaine R., Landweber, Laura F.
Publicado 2012

Draft Genome Sequence of Acetobacter aceti Strain 1023, a Vinegar Factory Isolate

por Hung, John E., Mill, Christopher P., Clifton, Sandra W., Magrini, Vincent, Bhide, Ketaki, Francois, Julie A., Ransome, Aaron E., Fulton, Lucinda, Thimmapuram, Jyothi, Wilson, Richard K., Kappock, T. Joseph
Publicado 2014

Somatic variation as an incidental finding in the pediatric next-generation sequencing era

por Melas, Marilena, Mathew, Mariam T., Mori, Mari, Jayaraman, Vijayakumar, Wilson, Sarah A., Martin, Cortlandt, Jacobson-Kelly, Amanda E., Kelly, Ben J., Magrini, Vincent, Mardis, Elaine R., Cottrell, Catherine E., Lee, Kristy
Publicado 2021

A common founding clone with TP53 and PTEN mutations gives rise to a concurrent germ cell tumor and acute megakaryoblastic leukemia

por Lu, Charles, Riedell, Peter, Miller, Christopher A., Hagemann, Ian S., Westervelt, Peter, Ozenberger, Bradley A., O'Laughlin, Michelle, Magrini, Vincent, Demeter, Ryan T., Duncavage, Eric J., Griffith, Malachi, Griffith, Obi L., Wartman, Lukas D.
Publicado 2016

Comprehensive gene expression meta-analysis identifies signature genes that distinguish microglia from peripheral monocytes/macrophages in health and glioma

por Haage, Verena, Semtner, Marcus, Vidal, Ramon Oliveira, Hernandez, Daniel Perez, Pong, Winnie W., Chen, Zhihong, Hambardzumyan, Dolores, Magrini, Vincent, Ly, Amy, Walker, Jason, Mardis, Elaine, Mertins, Philipp, Sauer, Sascha, Kettenmann, Helmut, Gutmann, David H.
Publicado 2019

Correction to: Comprehensive gene expression meta-analysis identifies signature genes that distinguish microglia from peripheral monocytes/macrophages in health and glioma

por Haage, Verena, Semtner, Marcus, Vidal, Ramon Oliveira, Hernandez, Daniel Perez, Pong, Winnie W., Chen, Zhihong, Hambardzumyan, Dolores, Magrini, Vincent, Ly, Amy, Walker, Jason, Mardis, Elaine, Mertins, Philipp, Sauer, Sascha, Kettenmann, Helmut, Gutmann, David H.
Publicado 2020

Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach

por Bainbridge, Matthew N, Warren, René L, Hirst, Martin, Romanuik, Tammy, Zeng, Thomas, Go, Anne, Delaney, Allen, Griffith, Malachi, Hickenbotham, Matthew, Magrini, Vincent, Mardis, Elaine R, Sadar, Marianne D, Siddiqui, Asim S, Marra, Marco A, Jones, Steven JM
Publicado 2006

Viral Discovery and Sequence Recovery Using DNA Microarrays

por Wang, David, Urisman, Anatoly, Liu, Yu-Tsueng, Springer, Michael, Ksiazek, Thomas G, Erdman, Dean D, Mardis, Elaine R, Hickenbotham, Matthew, Magrini, Vincent, Eldred, James, Latreille, J. Phillipe, Wilson, Richard K, Ganem, Don, DeRisi, Joseph L
Publicado 2003

RNA Sequencing of Tumor-Associated Microglia Reveals Ccl5 as a Stromal Chemokine Critical for Neurofibromatosis-1 Glioma Growth()

por Solga, Anne C., Pong, Winnie W., Kim, Keun-Young, Cimino, Patrick J., Toonen, Joseph A., Walker, Jason, Wylie, Todd, Magrini, Vincent, Griffith, Malachi, Griffith, Obi L., Ly, Amy, Ellisman, Mark H., Mardis, Elaine R., Gutmann, David H.
Publicado 2015

Somatic neurofibromatosis type 1 (NF1) inactivation characterizes NF1-associated pilocytic astrocytoma

por Gutmann, David H., McLellan, Michael D., Hussain, Ibrahim, Wallis, John W., Fulton, Lucinda L., Fulton, Robert S., Magrini, Vincent, Demeter, Ryan, Wylie, Todd, Kandoth, Cyriac, Leonard, Jeffrey R., Guha, Abhijit, Miller, Christopher A., Ding, Li, Mardis, Elaine R.
Publicado 2013

Samovar: Single-Sample Mosaic Single-Nucleotide Variant Calling with Linked Reads

por Darby, Charlotte A., Fitch, James R., Brennan, Patrick J., Kelly, Benjamin J., Bir, Natalie, Magrini, Vincent, Leonard, Jeffrey, Cottrell, Catherine E., Gastier-Foster, Julie M., Wilson, Richard K., Mardis, Elaine R., White, Peter, Langmead, Ben, Schatz, Michael C.
Publicado 2019

Infantile fibrosarcoma–like tumor driven by novel RBPMS-MET fusion consolidated with cabozantinib

por Gupta, Ajay, Belsky, Jennifer A., Schieffer, Kathleen M., Leraas, Kristen, Varga, Elizabeth, McGrath, Sean D., Koo, Selene C., Magrini, Vincent, Wilson, Richard K., White, Peter, Mardis, Elaine R., Jatana, Kris R., Cottrell, Catherine E., Setty, Bhuvana A.
Publicado 2020

A novel sialic acid-binding adhesin present in multiple species contributes to the pathogenesis of Infective endocarditis

por Gaytán, Meztlli O., Singh, Anirudh K., Woodiga, Shireen A., Patel, Surina A., An, Seon-Sook, Vera-Ponce de León, Arturo, McGrath, Sean, Miller, Anthony R., Bush, Jocelyn M., van der Linden, Mark, Magrini, Vincent, Wilson, Richard K., Kitten, Todd, King, Samantha J.
Publicado 2021

Genome sequencing identifies somatic BRAF duplication c.1794_1796dupTAC;p.Thr599dup in pediatric patient with low-grade ganglioglioma

por Miller, Katherine E., Kelly, Benjamin, Fitch, James, Ross, Nicole, Avenarius, Matthew R., Varga, Elizabeth, Koboldt, Daniel C., Boué, Daniel R., Magrini, Vincent, Coven, Scott L., Finlay, Jonathan L., Cottrell, Catherine E., White, Peter, Gastier-Foster, Julie M., Wilson, Richard K., Leonard, Jeffrey, Mardis, Elaine R.
Publicado 2018