Automatic recognition of complementary strands: lessons regarding machine learning abilities in RNA folding

por Chasles, Simon, Major, François
Publicado 2023

Automated extraction and classification of RNA tertiary structure cyclic motifs

por Lemieux, Sébastien, Major, François
Publicado 2006

The DynaSig-ML Python package: automated learning of biomolecular dynamics–function relationships

por Mailhot, Olivier, Major, François, Najmanovich, Rafael
Publicado 2023

Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure

por Reinharz, Vladimir, Major, François, Waldispühl, Jérôme
Publicado 2012

RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data

por Yao, Jason, Reinharz, Vladimir, Major, François, Waldispühl, Jérôme
Publicado 2017

RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data

por Yao, Jason, Reinharz, Vladimir, Major, François, Waldispühl, Jérôme
Publicado 2017

Modeling RNA tertiary structure motifs by graph-grammars

por St-Onge, Karine, Thibault, Philippe, Hamel, Sylvie, Major, François
Publicado 2007

RKB: a Semantic Web knowledge base for RNA

por Cruz-Toledo, Jose, Dumontier, Michel, Parisien, Marc, Major, François
Publicado 2010

Sequence-sensitive elastic network captures dynamical features necessary for miR-125a maturation

por Mailhot, Olivier, Frappier, Vincent, Major, François, Najmanovich, Rafael J.
Publicado 2022

Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA

por Ensterö, Mats, Daniel, Chammiran, Wahlstedt, Helene, Major, François, Öhman, Marie
Publicado 2009

MiRBooking simulates the stoichiometric mode of action of microRNAs

por Weill, Nathanaël, Lisi, Véronique, Scott, Nicolas, Dallaire, Paul, Pelloux, Julie, Major, François
Publicado 2015

Structural dynamics control the MicroRNA maturation pathway

por Dallaire, Paul, Tan, Huiping, Szulwach, Keith, Ma, Christopher, Jin, Peng, Major, François
Publicado 2016

Computational identification of RNA functional determinants by three-dimensional quantitative structure–activity relationships

por Blanchet, Marc-Frédérick, St-Onge, Karine, Lisi, Véronique, Robitaille, Julie, Hamel, Sylvie, Major, François
Publicado 2014

RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles

por Mullen, Melissa A., Olson, Kalee J., Dallaire, Paul, Major, François, Assmann, Sarah M., Bevilacqua, Philip C.
Publicado 2010

Designing small multiple-target artificial RNAs

por De Guire, Vincent, Caron, Maxime, Scott, Nicolas, Ménard, Catherine, Gaumont-Leclerc, Marie-France, Chartrand, Pascal, Major, François, Ferbeyre, Gerardo
Publicado 2010

A transcriptome-based approach to identify functional modules within and across primary human immune cells

por Mola, Saraï, Foisy, Sylvain, Boucher, Gabrielle, Major, François, Beauchamp, Claudine, Karaky, Mohamad, Goyette, Philippe, Lesage, Sylvie, Rioux, John D.
Publicado 2020

The sequence features that define efficient and specific hAGO2-dependent miRNA silencing guides

por Yan, Yifei, Acevedo, Mariana, Mignacca, Lian, Desjardins, Philippe, Scott, Nicolas, Imane, Roqaya, Quenneville, Jordan, Robitaille, Julie, Feghaly, Albert, Gagnon, Etienne, Ferbeyre, Gerardo, Major, François
Publicado 2018

Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs

por Hardy, Marie-Pierre, Audemard, Éric, Migneault, Francis, Feghaly, Albert, Brochu, Sylvie, Gendron, Patrick, Boilard, Éric, Major, François, Dieudé, Mélanie, Hébert, Marie-Josée, Perreault, Claude
Publicado 2019

CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation

por Daouda, Tariq, Dumont-Lagacé, Maude, Feghaly, Albert, Benslimane, Yahya, Panes, Rébecca, Courcelles, Mathieu, Benhammadi, Mohamed, Harrington, Lea, Thibault, Pierre, Major, François, Bengio, Yoshua, Gagnon, Étienne, Lemieux, Sébastien, Perreault, Claude
Publicado 2021

RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures

por Miao, Zhichao, Adamiak, Ryszard W., Blanchet, Marc-Frédérick, Boniecki, Michal, Bujnicki, Janusz M., Chen, Shi-Jie, Cheng, Clarence, Chojnowski, Grzegorz, Chou, Fang-Chieh, Cordero, Pablo, Cruz, José Almeida, Ferré-D'Amaré, Adrian R., Das, Rhiju, Ding, Feng, Dokholyan, Nikolay V., Dunin-Horkawicz, Stanislaw, Kladwang, Wipapat, Krokhotin, Andrey, Lach, Grzegorz, Magnus, Marcin, Major, François, Mann, Thomas H., Masquida, Benoît, Matelska, Dorota, Meyer, Mélanie, Peselis, Alla, Popenda, Mariusz, Purzycka, Katarzyna J., Serganov, Alexander, Stasiewicz, Juliusz, Szachniuk, Marta, Tandon, Arpit, Tian, Siqi, Wang, Jian, Xiao, Yi, Xu, Xiaojun, Zhang, Jinwei, Zhao, Peinan, Zok, Tomasz, Westhof, Eric
Publicado 2015