Digging deeper into the immunopeptidome: characterization of post-translationally modified peptides presented by MHC I

por Mangalaparthi, Kiran K., Madugundu, Anil K., Ryan, Zachary C., Garapati, Kishore, Peterson, Jane A., Dey, Gourav, Prakash, Amol, Pandey, Akhilesh
Publicado 2021

Quantitative proteome profiling stratifies fibroepithelial lesions of the breast

por Kumar, Aviral, Nayakanti, David S., Mangalaparthi, Kiran K., Gopinath, Veena, Reddy, Nandyala Venkat Narsimha, Govindan, Krishna, Voolapalli, Geeta, Kumar, Prashant, Kumar, Lekha Dinesh
Publicado 2021

Proteomic Signature of Host Response to SARS-CoV-2 Infection in the Nasopharynx

por Vanderboom, Patrick M., Mun, Dong-Gi, Madugundu, Anil K., Mangalaparthi, Kiran K., Saraswat, Mayank, Garapati, Kishore, Chakraborty, Rana, Ebihara, Hideki, Sun, Jie, Pandey, Akhilesh
Publicado 2021

Molecular Characterization of Esophageal Squamous Cell Carcinoma Using Quantitative Proteomics

por Mangalaparthi, Kiran K., Patel, Krishna, Khan, Aafaque Ahmad, Nair, Bipin, Kumar, Rekha V., Prasad, Thottethodi Subrahmanya Keshav, Sidransky, David, Chatterjee, Aditi, Pandey, Akhilesh, Gowda, Harsha
Publicado 2023

A SISCAPA-based approach for detection of SARS-CoV-2 viral antigens from clinical samples

por Mangalaparthi, Kiran K., Chavan, Sandip, Madugundu, Anil K., Renuse, Santosh, Vanderboom, Patrick M., Maus, Anthony D., Kemp, Jennifer, Kipp, Benjamin R., Grebe, Stefan K., Singh, Ravinder J., Pandey, Akhilesh
Publicado 2021

Correction: A SISCAPA-based approach for detection of SARS-CoV-2 viral antigens from clinical samples

por Mangalaparthi, Kiran K., Chavan, Sandip, Madugundu, Anil K., Renuse, Santosh, Vanderboom, Patrick M., Maus, Anthony D., Kemp, Jennifer, Kipp, Benjamin R., Grebe, Stefan K., Singh, Ravinder J., Pandey, Akhilesh
Publicado 2022

VapBC22 toxin-antitoxin system from Mycobacterium tuberculosis is required for pathogenesis and modulation of host immune response

por Agarwal, Sakshi, Sharma, Arun, Bouzeyen, Rania, Deep, Amar, Sharma, Harsh, Mangalaparthi, Kiran K., Datta, Keshava K., Kidwai, Saqib, Gowda, Harsha, Varadarajan, Raghavan, Sharma, Ravi Datta, Thakur, Krishan Gopal, Singh, Ramandeep
Publicado 2020

Comparison of anti-peptide and anti-protein antibody-based purification techniques for detection of SARS-CoV-2 by targeted LC-MS/MS

por Maus, Anthony, Renuse, Santosh, Kemp, Jennifer, Moehnke, Kayla, Mangalaparthi, Kiran K., Chavan, Sandip, Madugundu, Anil K., Vanderboom, Patrick M., Dasari, Surendra, Kipp, Benjamin R., Singh, Ravinder J., Grebe, Stefan K., Pandey, Akhilesh
Publicado 2022

A High-Throughput Workflow for FFPE Tissue Proteomics

por Pujari, Ganesh P., Mangalaparthi, Kiran K., Madden, Benjamin J., Bhat, Firdous A., Charlesworth, M. Cristine, French, Amy J., Sachdeva, Gunveen, Daviso, Eugenio, Thomann, Ulrich, McCarthy, Patrick, Vasantgadkar, Sameer, Bhattacharyya, Debadeep, Pandey, Akhilesh
Publicado 2023

Tyrosine Phosphoproteomics of Patient-Derived Xenografts Reveals Ephrin Type-B Receptor 4 Tyrosine Kinase as a Therapeutic Target in Pancreatic Cancer

por Renuse, Santosh, Madamsetty, Vijay S., Mun, Dong-Gi, Madugundu, Anil K., Singh, Smrita, Udainiya, Savita, Mangalaparthi, Kiran K., Kim, Min-Sik, Liu, Ren, Kumar, S. Ram, Krasnoperov, Valery, Truty, Mark, Graham, Rondell P., Gill, Parkash S., Mukhopadhyay, Debabrata, Pandey, Akhilesh
Publicado 2021

Mutational Landscape of Esophageal Squamous Cell Carcinoma in an Indian Cohort

por Mangalaparthi, Kiran K., Patel, Krishna, Khan, Aafaque A., Manoharan, Malini, Karunakaran, Coral, Murugan, Sakthivel, Gupta, Ravi, Gupta, Rohit, Khanna-Gupta, Arati, Chaudhuri, Amitabha, Kumar, Prashant, Nair, Bipin, Kumar, Rekha V., Prasad, T. S. Keshava, Chatterjee, Aditi, Pandey, Akhilesh, Gowda, Harsha
Publicado 2020

Multi-Omics Analysis to Characterize Cigarette Smoke Induced Molecular Alterations in Esophageal Cells

por Khan, Aafaque Ahmad, Patel, Krishna, Patil, Shankargouda, Babu, Niraj, Mangalaparthi, Kiran K., Solanki, Hitendra Singh, Nanjappa, Vishalakshi, Kumari, Anjali, Manoharan, Malini, Karunakaran, Coral, Murugan, Saktivel, Nair, Bipin, Kumar, Rekha V., Biswas, Manjusha, Sidransky, David, Gupta, Ravi, Gupta, Rohit, Khanna-Gupta, Arati, Kumar, Prashant, Chatterjee, Aditi, Gowda, Harsha
Publicado 2020

A mass spectrometry-based targeted assay for detection of SARS-CoV-2 antigen from clinical specimens

por Renuse, Santosh, Vanderboom, Patrick M., Maus, Anthony D., Kemp, Jennifer V., Gurtner, Kari M., Madugundu, Anil K., Chavan, Sandip, Peterson, Jane A., Madden, Benjamin J., Mangalaparthi, Kiran K., Mun, Dong-Gi, Singh, Smrita, Kipp, Benjamin R., Dasari, Surendra, Singh, Ravinder J., Grebe, Stefan K., Pandey, Akhilesh
Publicado 2021

Acute Kidney Injury in Severe COVID-19 Has Similarities to Sepsis-Associated Kidney Injury: A Multi-Omics Study

por Alexander, Mariam P., Mangalaparthi, Kiran K., Madugundu, Anil K., Moyer, Ann M., Adam, Benjamin A., Mengel, Michael, Singh, Smrita, Herrmann, Sandra M., Rule, Andrew D., Cheek, E. Heidi, Herrera Hernandez, Loren P., Graham, Rondell P., Aleksandar, Denic, Aubry, Marie-Christine, Roden, Anja C., Hagen, Catherine E., Quinton, Reade A., Bois, Melanie C., Lin, Peter T., Maleszewski, Joseph J., Cornell, Lynn D., Sethi, Sanjeev, Pavelko, Kevin D., Charlesworth, Jon, Narasimhan, Ramya, Larsen, Christopher P., Rizza, Stacey A., Nasr, Samih H., Grande, Joseph P., McKee, Trevor D., Badley, Andrew D., Pandey, Akhilesh, Taner, Timucin
Publicado 2021