Genome Complexity Browser: Visualization and quantification of genome variability

por Manolov, Alexander, Konanov, Dmitry, Fedorov, Dmitry, Osmolovsky, Ivan, Vereshchagin, Rinat, Ilina, Elena
Publicado 2020

Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads

por Konanov, Dmitry N, Babenko, Vladislav V, Belova, Aleksandra M, Madan, Arina G, Boldyreva, Daria I, Glushenko, Oksana E, Butenko, Ivan O, Fedorov, Dmitry E, Manolov, Alexander I, Krivonos, Danil V, Lazarev, Vassilii N, Govorun, Vadim M, Ilina, Elena N
Publicado 2023

Draft genomes of Enterococcus faecium strains isolated from human feces before and after eradication therapy against Helicobacter pylori

por Prianichnikov, Nikita A., Malakhova, Maja V., Babenko, Vlad V., Larin, Andrei K., Olekhnovich, Evgenii I., Starikova, Elizaveta V., Chuvelev, Dmitry I., Glushchenko, Oksana E., Samoilov, Andrei E., Manolov, Alexander I., Kovarsky, Boris A., Tyakht, Alexander V., Pavlenko, Alexander V., Ilina, Elena N., Kostryukova, Elena S.
Publicado 2017

Identification of unusual peptides with new Cys frameworks in the venom of the cold-water sea anemone Cnidopus japonicus

por Babenko, Vladislav V., Mikov, Alexander N., Manuvera, Valentin A., Anikanov, Nickolay A., Kovalchuk, Sergey I., Andreev, Yaroslav A., Logashina, Yulia A., Kornilov, Daniil A., Manolov, Alexander I., Sanamyan, Nadya P., Sanamyan, Karen E., Kostryukova, Elena S., Kozlov, Sergey A., Grishin, Eugene V., Govorun, Vadim M., Lazarev, Vassili N.
Publicado 2017

Proteomic dataset: Profiling of cultivated Echerichia coli isolates from Crohn's disease patients and healthy individuals

por Rakitina, Daria, Baikova, Julia, Pobeguts, Olga, Bukato, Olga, Butenko, Ivan, Garanina, Irina, Levites, Mark, Manolov, Alexander, Kanygina, Alexandra, Kostryukova, Elena, Semashko, Tatiana, Karpova, Irina, Babenko, Vladislav, Scherbakov, Petr, Khalif, Igor, Shapina, Marina, Parfenov, Asfold, Ruchkina, Irina, Knyazev, Oleg, Fadeeva, Nina, Subbotin, Alexandr, Chamkin, Sergey, Pyrkh, Alexandr, Ivantsova, Marina, Govorun, Vadim
Publicado 2019

Specific pools of endogenous peptides are present in gametophore, protonema, and protoplast cells of the moss Physcomitrella patens

por Fesenko, Igor A, Arapidi, Georgij P, Skripnikov, Alexander Yu, Alexeev, Dmitry G, Kostryukova, Elena S, Manolov, Alexander I, Altukhov, Ilya A, Khazigaleeva, Regina A, Seredina, Anna V, Kovalchuk, Sergey I, Ziganshin, Rustam H, Zgoda, Viktor G, Novikova, Svetlana E, Semashko, Tatiana A, Slizhikova, Darya K, Ptushenko, Vasilij V, Gorbachev, Alexey Y, Govorun, Vadim M, Ivanov, Vadim T
Publicado 2015

Ultrahigh-throughput functional profiling of microbiota communities

por Terekhov, Stanislav S., Smirnov, Ivan V., Malakhova, Maja V., Samoilov, Andrei E., Manolov, Alexander I., Nazarov, Anton S., Danilov, Dmitry V., Dubiley, Svetlana A., Osterman, Ilya A., Rubtsova, Maria P., Kostryukova, Elena S., Ziganshin, Rustam H., Kornienko, Maria A., Vanyushkina, Anna A., Bukato, Olga N., Ilina, Elena N., Vlasov, Valentin V., Severinov, Konstantin V., Gabibov, Alexander G., Altman, Sidney
Publicado 2018

Novel Klebsiella pneumoniae K23-Specific Bacteriophages From Different Families: Similarity of Depolymerases and Their Therapeutic Potential

por Gorodnichev, Roman B., Volozhantsev, Nikolay V., Krasilnikova, Valentina M., Bodoev, Ivan N., Kornienko, Maria A., Kuptsov, Nikita S., Popova, Anastasia V., Makarenko, Galina I., Manolov, Alexander I., Slukin, Pavel V., Bespiatykh, Dmitry A., Verevkin, Vladimir V., Denisenko, Egor A., Kulikov, Eugene E., Veselovsky, Vladimir A., Malakhova, Maja V., Dyatlov, Ivan A., Ilina, Elena N., Shitikov, Egor A.
Publicado 2021

Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches

por Babenko, Vladislav V., Podgorny, Oleg V., Manuvera, Valentin A., Kasianov, Artem S., Manolov, Alexander I., Grafskaia, Ekaterina N., Shirokov, Dmitriy A., Kurdyumov, Alexey S., Vinogradov, Dmitriy V., Nikitina, Anastasia S., Kovalchuk, Sergey I., Anikanov, Nickolay A., Butenko, Ivan O., Pobeguts, Olga V., Matyushkina, Daria S., Rakitina, Daria V., Kostryukova, Elena S., Zgoda, Victor G., Baskova, Isolda P., Trukhan, Vladimir M., Gelfand, Mikhail S., Govorun, Vadim M., Schiöth, Helgi B., Lazarev, Vassili N.
Publicado 2020

Correction to: Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches

por Babenko, Vladislav V., Podgorny, Oleg V., Manuvera, Valentin A., Kasianov, Artem S., Manolov, Alexander I., Grafskaia, Ekaterina N., Shirokov, Dmitriy A., Kurdyumov, Alexey S., Vinogradov, Dmitriy V., Nikitina, Anastasia S., Kovalchuk, Sergey I., Anikanov, Nickolay A., Butenko, Ivan O., Pobeguts, Olga V., Matyushkina, Daria S., Rakitina, Daria V., Kostryukova, Elena S., Zgoda, Victor G., Baskova, Isolda P., Trukhan, Vladimir M., Gelfand, Mikhail S., Govorun, Vadim M., Schiöth, Helgi B., Lazarev, Vassili N.
Publicado 2020

Shifts in the Human Gut Microbiota Structure Caused by Quadruple Helicobacter pylori Eradication Therapy

por Olekhnovich, Evgenii I., Manolov, Alexander I., Samoilov, Andrey E., Prianichnikov, Nikita A., Malakhova, Maja V., Tyakht, Alexander V., Pavlenko, Alexander V., Babenko, Vlad V., Larin, Andrey K., Kovarsky, Boris A., Starikova, Elizaveta V., Glushchenko, Oksana E., Safina, Dilyara D., Markelova, Maria I., Boulygina, Eugenia A., Khusnutdinova, Dilyara R., Malanin, Sergey Y., Abdulkhakov, Sayar R., Abdulkhakov, Rustam A., Grigoryeva, Tatiana V., Kostryukova, Elena S., Govorun, Vadim M., Ilina, Elena N.
Publicado 2019

Genome analysis of E. coli isolated from Crohn’s disease patients

por Rakitina, Daria V., Manolov, Alexander I., Kanygina, Alexandra V., Garushyants, Sofya K., Baikova, Julia P., Alexeev, Dmitry G., Ladygina, Valentina G., Kostryukova, Elena S., Larin, Andrei K., Semashko, Tatiana A., Karpova, Irina Y., Babenko, Vladislav V., Ismagilova, Ruzilya K., Malanin, Sergei Y., Gelfand, Mikhail S., Ilina, Elena N., Gorodnichev, Roman B., Lisitsyna, Eugenia S., Aleshkin, Gennady I., Scherbakov, Petr L., Khalif, Igor L., Shapina, Marina V., Maev, Igor V., Andreev, Dmitry N., Govorun, Vadim M.
Publicado 2017

Long-term impact of fecal transplantation in healthy volunteers

por Goloshchapov, Oleg V., Olekhnovich, Evgenii I., Sidorenko, Sergey V., Moiseev, Ivan S., Kucher, Maxim A., Fedorov, Dmitry E., Pavlenko, Alexander V., Manolov, Alexander I., Gostev, Vladimir V., Veselovsky, Vladimir A., Klimina, Ksenia M., Kostryukova, Elena S., Bakin, Evgeny A., Shvetcov, Alexander N., Gumbatova, Elvira D., Klementeva, Ruslana V., Shcherbakov, Alexander A., Gorchakova, Margarita V., Egozcue, Juan José, Pawlowsky-Glahn, Vera, Suvorova, Maria A., Chukhlovin, Alexey B., Govorun, Vadim M., Ilina, Elena N., Afanasyev, Boris V.
Publicado 2019

Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn’s disease discovered using metagenomic and genomic analyses

por Tyakht, Alexander V., Manolov, Alexander I., Kanygina, Alexandra V., Ischenko, Dmitry S., Kovarsky, Boris A., Popenko, Anna S., Pavlenko, Alexander V., Elizarova, Anna V., Rakitina, Daria V., Baikova, Julia P., Ladygina, Valentina G., Kostryukova, Elena S., Karpova, Irina Y., Semashko, Tatyana A., Larin, Andrei K., Grigoryeva, Tatyana V., Sinyagina, Mariya N., Malanin, Sergei Y., Shcherbakov, Petr L., Kharitonova, Anastasiya Y., Khalif, Igor L., Shapina, Marina V., Maev, Igor V., Andreev, Dmitriy N., Belousova, Elena A., Buzunova, Yulia M., Alexeev, Dmitry G., Govorun, Vadim M.
Publicado 2018

16S rRNA gene sequencing data of the upper respiratory tract microbiome in the SARS-CoV-2 infected patients

por Galeeva, Julia, Babenko, Vladislav, Bakhtyev, Ramiz, Baklaushev, Vladimir, Balykova, Larisa, Bashkirov, Pavel, Bespyatykh, Julia, Blagonravova, Anna, Boldyreva, Daria, Fedorov, Dmitry, Gafurov, Ilshat, Gaifullina, Raushaniya, Galova, Elena, Gospodaryk, Alina, Ilina, Elena, Ivanov, Konstantin, Kharlampieva, Daria, Khromova, Polina, Klimina, Ksenia, Kolontarev, Konstantin, Kolyshkina, Nadezhda, Koritsky, Andrey, Kuropatkin, Vyacheslav, Lazarev, Vasily, Manolov, Alexander, Manuvera, Valentin, Matyushkina, Daria, Morozov, Maxim, Moskaleva, Ekaterina, Musarova, Varvara, Ogarkov, Oleg, Orlova, Elizaveta, Pavlenko, Alexander, Petrova, Alla, Pozhenko, Natalia, Pushkar, Dmitry, Rumyantsev, Alexander, Rumyantsev, Sergey, Rumyantsev, Vladimir, Rychkova, Lyubov, Samoilov, Alexander, Shirokova, Irina, Sinkov, Vyacheslav, Solovieva, Svetlana, Starikova, Elizaveta, Tikhonova, Polina, Trifonova, Galina, Troitsky, Alexander, Tulichev, Alexander, Udalov, Yuri, Varizhuk, Anna, Vasiliev, Alexander, Veselovsky, Vladimir, Vereshchagin, Rinat, Volnukhin, Alexey, Yusubalieva, Gaukhar, Govorun, Vadim
Publicado 2021