Fast gap-affine pairwise alignment using the wavefront algorithm

por Marco-Sola, Santiago, Moure, Juan Carlos, Moreto, Miquel, Espinosa, Antonio
Publicado 2020

AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication

por Song, Baoxing, Marco-Sola, Santiago, Moreto, Miquel, Johnson, Lynn, Buckler, Edward S., Stitzer, Michelle C.
Publicado 2021

Optimal gap-affine alignment in O(s) space

por Marco-Sola, Santiago, Eizenga, Jordan M, Guarracino, Andrea, Paten, Benedict, Garrison, Erik, Moreto, Miquel
Publicado 2023

Fast Computation and Applications of Genome Mappability

por Derrien, Thomas, Estellé, Jordi, Marco Sola, Santiago, Knowles, David G., Raineri, Emanuele, Guigó, Roderic, Ribeca, Paolo
Publicado 2012

WFA-GPU: gap-affine pairwise read-alignment using GPUs

por Aguado-Puig, Quim, Doblas, Max, Matzoros, Christos, Espinosa, Antonio, Moure, Juan Carlos, Marco-Sola, Santiago, Moreto, Miquel
Publicado 2023

ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data

por Rodríguez-Martín, Bernardo, Palumbo, Emilio, Marco-Sola, Santiago, Griebel, Thasso, Ribeca, Paolo, Alonso, Graciela, Rastrojo, Alberto, Aguado, Begoña, Guigó, Roderic, Djebali, Sarah
Publicado 2017

From Wet‐Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing

por Laurie, Steve, Fernandez‐Callejo, Marcos, Marco‐Sola, Santiago, Trotta, Jean‐Remi, Camps, Jordi, Chacón, Alejandro, Espinosa, Antonio, Gut, Marta, Gut, Ivo, Heath, Simon, Beltran, Sergi
Publicado 2016

A draft human pangenome reference

por Liao, Wen-Wei, Asri, Mobin, Ebler, Jana, Doerr, Daniel, Haukness, Marina, Hickey, Glenn, Lu, Shuangjia, Lucas, Julian K., Monlong, Jean, Abel, Haley J., Buonaiuto, Silvia, Chang, Xian H., Cheng, Haoyu, Chu, Justin, Colonna, Vincenza, Eizenga, Jordan M., Feng, Xiaowen, Fischer, Christian, Fulton, Robert S., Garg, Shilpa, Groza, Cristian, Guarracino, Andrea, Harvey, William T., Heumos, Simon, Howe, Kerstin, Jain, Miten, Lu, Tsung-Yu, Markello, Charles, Martin, Fergal J., Mitchell, Matthew W., Munson, Katherine M., Mwaniki, Moses Njagi, Novak, Adam M., Olsen, Hugh E., Pesout, Trevor, Porubsky, David, Prins, Pjotr, Sibbesen, Jonas A., Sirén, Jouni, Tomlinson, Chad, Villani, Flavia, Vollger, Mitchell R., Antonacci-Fulton, Lucinda L., Baid, Gunjan, Baker, Carl A., Belyaeva, Anastasiya, Billis, Konstantinos, Carroll, Andrew, Chang, Pi-Chuan, Cody, Sarah, Cook, Daniel E., Cook-Deegan, Robert M., Cornejo, Omar E., Diekhans, Mark, Ebert, Peter, Fairley, Susan, Fedrigo, Olivier, Felsenfeld, Adam L., Formenti, Giulio, Frankish, Adam, Gao, Yan, Garrison, Nanibaa’ A., Giron, Carlos Garcia, Green, Richard E., Haggerty, Leanne, Hoekzema, Kendra, Hourlier, Thibaut, Ji, Hanlee P., Kenny, Eimear E., Koenig, Barbara A., Kolesnikov, Alexey, Korbel, Jan O., Kordosky, Jennifer, Koren, Sergey, Lee, HoJoon, Lewis, Alexandra P., Magalhães, Hugo, Marco-Sola, Santiago, Marijon, Pierre, McCartney, Ann, McDaniel, Jennifer, Mountcastle, Jacquelyn, Nattestad, Maria, Nurk, Sergey, Olson, Nathan D., Popejoy, Alice B., Puiu, Daniela, Rautiainen, Mikko, Regier, Allison A., Rhie, Arang, Sacco, Samuel, Sanders, Ashley D., Schneider, Valerie A., Schultz, Baergen I., Shafin, Kishwar, Smith, Michael W., Sofia, Heidi J., Abou Tayoun, Ahmad N., Thibaud-Nissen, Françoise, Tricomi, Francesca Floriana, Wagner, Justin, Walenz, Brian, Wood, Jonathan M. D., Zimin, Aleksey V., Bourque, Guillaume, Chaisson, Mark J. P., Flicek, Paul, Phillippy, Adam M., Zook, Justin M., Eichler, Evan E., Haussler, David, Wang, Ting, Jarvis, Erich D., Miga, Karen H., Garrison, Erik, Marschall, Tobias, Hall, Ira M., Li, Heng, Paten, Benedict
Publicado 2023