A Web Tool for Generating High Quality Machine-readable Biological Pathways

por Ramirez-Gaona, Miguel, Marcu, Ana, Pon, Allison, Grant, Jason, Wu, Anthony, Wishart, David S.
Publicado 2017

PHASTER: a better, faster version of the PHAST phage search tool

por Arndt, David, Grant, Jason R., Marcu, Ana, Sajed, Tanvir, Pon, Allison, Liang, Yongjie, Wishart, David S.
Publicado 2016

Heatmapper: web-enabled heat mapping for all

por Babicki, Sasha, Arndt, David, Marcu, Ana, Liang, Yongjie, Grant, Jason R., Maciejewski, Adam, Wishart, David S.
Publicado 2016

Citrullinated Epitopes Identified on Tumour MHC Class II by Peptide Elution Stimulate Both Regulatory and Th1 Responses and Require Careful Selection for Optimal Anti-Tumour Respon...

por Symonds, Peter, Marcu, Ana, Cook, Katherine W., Metheringham, Rachael L., Durrant, Lindy G., Brentville, Victoria A.
Publicado 2021

TAPBPR mediates peptide dissociation from MHC class I using a leucine lever

por Ilca, F Tudor, Neerincx, Andreas, Hermann, Clemens, Marcu, Ana, Stevanović, Stefan, Deane, Janet E, Boyle, Louise H
Publicado 2018

ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli

por Sajed, Tanvir, Marcu, Ana, Ramirez, Miguel, Pon, Allison, Guo, An Chi, Knox, Craig, Wilson, Michael, Grant, Jason R., Djoumbou, Yannick, Wishart, David S.
Publicado 2016

Autophagic digestion of Leishmania major by host macrophages is associated with differential expression of BNIP3, CTSE, and the miRNAs miR-101c, miR-129, and miR-210

por Frank, Benjamin, Marcu, Ana, de Oliveira Almeida Petersen, Antonio Luis, Weber, Heike, Stigloher, Christian, Mottram, Jeremy C., Scholz, Claus Juergen, Schurigt, Uta
Publicado 2015

YMDB 2.0: a significantly expanded version of the yeast metabolome database

por Ramirez-Gaona, Miguel, Marcu, Ana, Pon, Allison, Guo, An Chi, Sajed, Tanvir, Wishart, Noah A., Karu, Naama, Djoumbou Feunang, Yannick, Arndt, David, Wishart, David S.
Publicado 2017

PAMDB: a comprehensive Pseudomonas aeruginosa metabolome database

por Huang, Weiliang, Brewer, Luke K, Jones, Jace W, Nguyen, Angela T, Marcu, Ana, Wishart, David S, Oglesby-Sherrouse, Amanda G, Kane, Maureen A, Wilks, Angela
Publicado 2018

Prostaglandin E(2) in a TLR3- and 7/8-agonist-based DC maturation cocktail generates mature, cytokine-producing, migratory DCs but impairs antigen cross-presentation to CD8(+) T ce...

por Gierlich, Philipp, Lex, Veronika, Technau, Antje, Keupp, Anne, Morper, Lorenz, Glunz, Amelie, Sennholz, Hanno, Rachor, Johannes, Sauer, Sascha, Marcu, Ana, Grigoleit, Götz Ulrich, Wölfl, Matthias, Schlegel, Paul G., Eyrich, Matthias
Publicado 2020

Immunopeptidomics-Guided Warehouse Design for Peptide-Based Immunotherapy in Chronic Lymphocytic Leukemia

por Nelde, Annika, Maringer, Yacine, Bilich, Tatjana, Salih, Helmut R., Roerden, Malte, Heitmann, Jonas S., Marcu, Ana, Bauer, Jens, Neidert, Marian C., Denzlinger, Claudio, Illerhaus, Gerald, Aulitzky, Walter Erich, Rammensee, Hans-Georg, Walz, Juliane S.
Publicado 2021

Mass spectrometry-based identification of a B-cell maturation antigen-derived T-cell epitope for antigen-specific immunotherapy of multiple myeloma

por Bilich, Tatjana, Nelde, Annika, Bauer, Jens, Walz, Simon, Roerden, Malte, Salih, Helmut R., Weisel, Katja, Besemer, Britta, Marcu, Ana, Lübke, Maren, Schuhmacher, Juliane, Neidert, Marian C., Rammensee, Hans-Georg, Stevanović, Stefan, Walz, Juliane S.
Publicado 2020

Understanding the constitutive presentation of MHC class I immunopeptidomes in primary tissues

por Kubiniok, Peter, Marcu, Ana, Bichmann, Leon, Kuchenbecker, Leon, Schuster, Heiko, Hamelin, David J., Duquette, Jérôme D., Kovalchik, Kevin A., Wessling, Laura, Kohlbacher, Oliver, Rammensee, Hans-Georg, Neidert, Marian C., Sirois, Isabelle, Caron, Etienne
Publicado 2022

PathBank: a comprehensive pathway database for model organisms

por Wishart, David S, Li, Carin, Marcu, Ana, Badran, Hasan, Pon, Allison, Budinski, Zachary, Patron, Jonas, Lipton, Debra, Cao, Xuan, Oler, Eponine, Li, Krissa, Paccoud, Maïlys, Hong, Chelsea, Guo, An C, Chan, Christopher, Wei, William, Ramirez-Gaona, Miguel
Publicado 2020

Identification of HCMV-derived T cell epitopes in seropositive individuals through viral deletion models

por Lübke, Maren, Spalt, Stefanie, Kowalewski, Daniel J., Zimmermann, Cosima, Bauersfeld, Liane, Nelde, Annika, Bichmann, Leon, Marcu, Ana, Peper, Janet Kerstin, Kohlbacher, Oliver, Walz, Juliane S., Le-Trilling, Vu Thuy Khanh, Hengel, Hartmut, Rammensee, Hans-Georg, Stevanović, Stefan, Halenius, Anne
Publicado 2019

DrugBank 5.0: a major update to the DrugBank database for 2018

por Wishart, David S, Feunang, Yannick D, Guo, An C, Lo, Elvis J, Marcu, Ana, Grant, Jason R, Sajed, Tanvir, Johnson, Daniel, Li, Carin, Sayeeda, Zinat, Assempour, Nazanin, Iynkkaran, Ithayavani, Liu, Yifeng, Maciejewski, Adam, Gale, Nicola, Wilson, Alex, Chin, Lucy, Cummings, Ryan, Le, Diana, Pon, Allison, Knox, Craig, Wilson, Michael
Publicado 2018

Natural and cryptic peptides dominate the immunopeptidome of atypical teratoid rhabdoid tumors

por Marcu, Ana, Schlosser, Andreas, Keupp, Anne, Trautwein, Nico, Johann, Pascal, Wölfl, Matthias, Lager, Johanna, Monoranu, Camelia Maria, Walz, Juliane S, Henkel, Lisa M, Krauß, Jürgen, Ebinger, Martin, Schuhmann, Martin, Thomale, Ulrich Wilhelm, Pietsch, Torsten, Klinker, Erdwine, Schlegel, Paul G, Oyen, Florian, Reisner, Yair, Rammensee, Hans-Georg, Eyrich, Matthias
Publicado 2021

HMDB 4.0: the human metabolome database for 2018

por Wishart, David S, Feunang, Yannick Djoumbou, Marcu, Ana, Guo, An Chi, Liang, Kevin, Vázquez-Fresno, Rosa, Sajed, Tanvir, Johnson, Daniel, Li, Carin, Karu, Naama, Sayeeda, Zinat, Lo, Elvis, Assempour, Nazanin, Berjanskii, Mark, Singhal, Sandeep, Arndt, David, Liang, Yonjie, Badran, Hasan, Grant, Jason, Serra-Cayuela, Arnau, Liu, Yifeng, Mandal, Rupa, Neveu, Vanessa, Pon, Allison, Knox, Craig, Wilson, Michael, Manach, Claudine, Scalbert, Augustin
Publicado 2018

HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy

por Marcu, Ana, Bichmann, Leon, Kuchenbecker, Leon, Kowalewski, Daniel Johannes, Freudenmann, Lena Katharina, Backert, Linus, Mühlenbruch, Lena, Szolek, András, Lübke, Maren, Wagner, Philipp, Engler, Tobias, Matovina, Sabine, Wang, Jian, Hauri-Hohl, Mathias, Martin, Roland, Kapolou, Konstantina, Walz, Juliane Sarah, Velz, Julia, Moch, Holger, Regli, Luca, Silginer, Manuela, Weller, Michael, Löffler, Markus W., Erhard, Florian, Schlosser, Andreas, Kohlbacher, Oliver, Stevanović, Stefan, Rammensee, Hans-Georg, Neidert, Marian Christoph
Publicado 2021

Keratinocyte differentiation antigen-specific T cells in immune checkpoint inhibitor-treated NSCLC patients are associated with improved survival

por Berner, Fiamma, Niederer, Rebekka, Luimstra, Jolien J., Pop, Oltin Tiberiu, Jochum, Ann-Kristin, Purde, Mette-Triin, Hasan Ali, Omar, Bomze, David, Bauer, Jens, Freudenmann, Lena Katharina, Marcu, Ana, Wolfschmitt, Eva-Maria, Haen, Sebastian, Gross, Thorben, Dubbelaar, Marissa Lisa, Abdou, Marie-Therese, Baumgaertner, Petra, Appenzeller, Christina, Cicin-Sain, Caroline, Lenz, Tobias, Speiser, Daniel E., Ludewig, Burkhard, Driessen, Christoph, Jörger, Markus, Früh, Martin, Jochum, Wolfram, Cozzio, Antonio, Rammensee, Hans-Georg, Walz, Juliane, Neefjes, Jacques, Flatz, Lukas
Publicado 2021