MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple replicates

por Bérard, Caroline, Seifert, Michael, Mary-Huard, Tristan, Martin-Magniette, Marie-Laure
Publicado 2013

DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models

por Lambert, Ilana, Paysant-Le Roux, Christine, Colella, Stefano, Martin-Magniette, Marie-Laure
Publicado 2020

Nitrogen Limitation Alters the Response of Specific Genes to Biotic Stress

por Farjad, Mahsa, Rigault, Martine, Pateyron, Stéphanie, Martin-Magniette, Marie-Laure, Krapp, Anne, Meyer, Christian, Fagard, Mathilde
Publicado 2018

Identification of a Transcriptomic Prognostic Signature by Machine Learning Using a Combination of Small Cohorts of Prostate Cancer

por Vittrant, Benjamin, Leclercq, Mickael, Martin-Magniette, Marie-Laure, Collins, Colin, Bergeron, Alain, Fradet, Yves, Droit, Arnaud
Publicado 2020

Search for the genes involved in oocyte maturation and early embryo development in the hen

por Elis, Sebastien, Batellier, Florence, Couty, Isabelle, Balzergue, Sandrine, Martin-Magniette, Marie-Laure, Monget, Philippe, Blesbois, Elisabeth, Govoroun, Marina S
Publicado 2008

Normalization for triple-target microarray experiments

por Martin-Magniette, Marie-Laure, Aubert, Julie, Bar-Hen, Avner, Elftieh, Samira, Magniette, Frederic, Renou, Jean-Pierre, Daudin, Jean-Jacques
Publicado 2008

Large-Scale Automatic Feature Selection for Biomarker Discovery in High-Dimensional OMICs Data

por Leclercq, Mickael, Vittrant, Benjamin, Martin-Magniette, Marie Laure, Scott Boyer, Marie Pier, Perin, Olivier, Bergeron, Alain, Fradet, Yves, Droit, Arnaud
Publicado 2019

Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27

por Turck, Franziska, Roudier, François, Farrona, Sara, Martin-Magniette, Marie-Laure, Guillaume, Elodie, Buisine, Nicolas, Gagnot, Séverine, Martienssen, Robert A, Coupland, George, Colot, Vincent
Publicado 2007

Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance

por Ramel, Fanny, Sulmon, Cécile, Cabello-Hurtado, Francisco, Taconnat, Ludivine, Martin-Magniette, Marie-Laure, Renou, Jean-Pierre, El Amrani, Abdelhak, Couée, Ivan, Gouesbet, Gwenola
Publicado 2007

Transcriptome analysis in Hevea brasiliensis latex revealed changes in hormone signalling pathways during ethephon stimulation and consequent Tapping Panel Dryness

por Montoro, Pascal, Wu, Shuangyang, Favreau, Bénédicte, Herlinawati, Eva, Labrune, Cécile, Martin-Magniette, Marie-Laure, Pointet, Stéphanie, Rio, Maryannick, Leclercq, Julie, Ismawanto, Sigit, Kuswanhadi
Publicado 2018

Novel Cytonuclear Combinations Modify Arabidopsis thaliana Seed Physiology and Vigor

por Boussardon, Clément, Martin-Magniette, Marie-Laure, Godin, Béatrice, Benamar, Abdelilah, Vittrant, Benjamin, Citerne, Sylvie, Mary-Huard, Tristan, Macherel, David, Rajjou, Loïc, Budar, Françoise
Publicado 2019

CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform

por Gagnot, Séverine, Tamby, Jean-Philippe, Martin-Magniette, Marie-Laure, Bitton, Frédérique, Taconnat, Ludivine, Balzergue, Sandrine, Aubourg, Sébastien, Renou, Jean-Pierre, Lecharny, Alain, Brunaud, Véronique
Publicado 2008

Transcriptome Analysis Describing New Immunity and Defense Genes in Peripheral Blood Mononuclear Cells of Rheumatoid Arthritis Patients

por Teixeira, Vitor Hugo, Olaso, Robert, Martin-Magniette, Marie-Laure, Lasbleiz, Sandra, Jacq, Laurent, Oliveira, Catarina Resende, Hilliquin, Pascal, Gut, Ivo, Cornelis, François, Petit-Teixeira, Elisabeth
Publicado 2009

Responses of mature symbiotic nodules to the whole-plant systemic nitrogen signaling

por Lambert, Ilana, Pervent, Marjorie, Le Queré, Antoine, Clément, Gilles, Tauzin, Marc, Severac, Dany, Benezech, Claire, Tillard, Pascal, Martin-Magniette, Marie-Laure, Colella, Stefano, Lepetit, Marc
Publicado 2020

Involvement of SUT1 and SUT2 Sugar Transporters in the Impairment of Sugar Transport and Changes in Phloem Exudate Contents in Phytoplasma-Infected Plants

por Marco, Federica De, Batailler, Brigitte, Thorpe, Michael R., Razan, Frédérique, Le Hir, Rozenn, Vilaine, Françoise, Bouchereau, Alain, Martin-Magniette, Marie-Laure, Eveillard, Sandrine, Dinant, Sylvie
Publicado 2021

Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

por Faivre Rampant, Patricia, Lesur, Isabelle, Boussardon, Clément, Bitton, Frédérique, Martin-Magniette, Marie-Laure, Bodénès, Catherine, Le Provost, Grégoire, Bergès, Hélène, Fluch, Sylvia, Kremer, Antoine, Plomion, Christophe
Publicado 2011

Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum

por Pasquet, Jean-Claude, Chaouch, Séjir, Macadré, Catherine, Balzergue, Sandrine, Huguet, Stéphanie, Martin-Magniette, Marie-Laure, Bellvert, Floriant, Deguercy, Xavier, Thareau, Vincent, Heintz, Dimitri, Saindrenan, Patrick, Dufresne, Marie
Publicado 2014

Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome

por Aubourg, Sébastien, Martin-Magniette, Marie-Laure, Brunaud, Véronique, Taconnat, Ludivine, Bitton, Frédérique, Balzergue, Sandrine, Jullien, Pauline E, Ingouff, Mathieu, Thareau, Vincent, Schiex, Thomas, Lecharny, Alain, Renou, Jean-Pierre
Publicado 2007

Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes

por Cohen, David, Bogeat-Triboulot, Marie-Béatrice, Tisserant, Emilie, Balzergue, Sandrine, Martin-Magniette, Marie-Laure, Lelandais, Gaëlle, Ningre, Nathalie, Renou, Jean-Pierre, Tamby, Jean-Philippe, Le Thiec, Didier, Hummel, Irène
Publicado 2010

A Gene-Phenotype Network Based on Genetic Variability for Drought Responses Reveals Key Physiological Processes in Controlled and Natural Environments

por Rengel, David, Arribat, Sandrine, Maury, Pierre, Martin-Magniette, Marie-Laure, Hourlier, Thibaut, Laporte, Marion, Varès, Didier, Carrère, Sébastien, Grieu, Philippe, Balzergue, Sandrine, Gouzy, Jérôme, Vincourt, Patrick, Langlade, Nicolas B.
Publicado 2012