Virtually embedded: the librarian in an online environment

por Leonard, Elizabeth, McCaffrey, Erin
Publicado 2014

Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering

por Liu, Candace C., Greenwald, Noah F., Kong, Alex, McCaffrey, Erin F., Leow, Ke Xuan, Mrdjen, Dunja, Cannon, Bryan J., Rumberger, Josef Lorenz, Varra, Sricharan Reddy, Angelo, Michael
Publicado 2023

Multiplexed imaging reveals an IFN-γ-driven inflammatory state in nivolumab-associated gastritis

por Ferrian, Selena, Liu, Candace C., McCaffrey, Erin F., Kumar, Rashmi, Nowicki, Theodore S., Dawson, David W., Baranski, Alex, Glaspy, John A., Ribas, Antoni, Bendall, Sean C., Angelo, Michael
Publicado 2021

Single-cell metabolic profiling of human cytotoxic T cells

por Hartmann, Felix J., Mrdjen, Dunja, McCaffrey, Erin, Glass, David R., Greenwald, Noah F., Bharadwaj, Anusha, Khair, Zumana, Verberk, Sanne G.S., Baranski, Alex, Baskar, Reema, Graf, William, Van Valen, David, den Bossche, Jan Van, Angelo, Michael, Bendall, Sean C.
Publicado 2020

MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure

por Keren, Leeat, Bosse, Marc, Thompson, Steve, Risom, Tyler, Vijayaragavan, Kausalia, McCaffrey, Erin, Marquez, Diana, Angoshtari, Roshan, Greenwald, Noah F., Fienberg, Harris, Wang, Jennifer, Kambham, Neeraja, Kirkwood, David, Nolan, Garry, Montine, Thomas J., Galli, Stephen J., West, Robert, Bendall, Sean C., Angelo, Michael
Publicado 2019

Spatial epitope barcoding reveals clonal tumor patch behaviors

por Rovira-Clavé, Xavier, Drainas, Alexandros P., Jiang, Sizun, Bai, Yunhao, Baron, Maya, Zhu, Bokai, Dallas, Alec E., Lee, Myung Chang, Chu, Theresa P., Holzem, Alessandra, Ayyagari, Ramya, Bhattacharya, Debadrita, McCaffrey, Erin F., Greenwald, Noah F., Markovic, Maxim, Coles, Garry L., Angelo, Michael, Bassik, Michael C., Sage, Julien, Nolan, Garry P.
Publicado 2022

Single-cell spatial proteomic imaging for human neuropathology

por Vijayaragavan, Kausalia, Cannon, Bryan J., Tebaykin, Dmitry, Bossé, Marc, Baranski, Alex, Oliveria, J. P., Bukhari, Syed A., Mrdjen, Dunja, Corces, M. Ryan, McCaffrey, Erin F., Greenwald, Noah F., Sigal, Yari, Marquez, Diana, Khair, Zumana, Bruce, Trevor, Goldston, Mako, Bharadwaj, Anusha, Montine, Kathleen S., Angelo, R. Michael, Montine, Thomas J., Bendall, Sean C.
Publicado 2022

Spatial proteomics reveals human microglial states shaped by anatomy and neuropathology

por Mrdjen, Dunja, Amouzgar, Meelad, Cannon, Bryan, Liu, Candace, Spence, Angie, McCaffrey, Erin, Bharadwaj, Anusha, Tebaykin, Dmitry, Bukhari, Syed, Hartmann, Felix J., Kagel, Adam, Vijayaragavan, Kausalia, Oliveria, John Paul, Yakabi, Koya, Serrano, Geidy E., Corrada, Maria M., Kawas, Claudia H., Camacho, Christine, Bosse, Marc, Tibshirani, Robert, Beach, Thomas G., Angelo, Michael, Montine, Thomas, Bendall, Sean C.
Publicado 2023

Rhesus Macaque CODEX Multiplexed Immunohistochemistry Panel for Studying Immune Responses During Ebola Infection

por Jiang, Sizun, Mukherjee, Nilanjan, Bennett, Richard S., Chen, Han, Logue, James, Dighero-Kemp, Bonnie, Kurtz, Jonathan R., Adams, Ricky, Phillips, Darci, Schürch, Christian M., Goltsev, Yury, Hickey, John W., McCaffrey, Erin F., Delmastro, Alea, Chu, Pauline, Reader, J. Rachel, Keesler, Rebekah I., Galván, José A., Zlobec, Inti, Van Rompay, Koen K. A., Liu, David X., Hensley, Lisa E., Nolan, Garry P., McIlwain, David R.
Publicado 2021

Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma

por Risom, Tyler, Glass, David R., Averbukh, Inna, Liu, Candace C., Baranski, Alex, Kagel, Adam, McCaffrey, Erin F., Greenwald, Noah F., Rivero-Gutiérrez, Belén, Strand, Siri H., Varma, Sushama, Kong, Alex, Keren, Leeat, Srivastava, Sucheta, Zhu, Chunfang, Khair, Zumana, Veis, Deborah J., Deschryver, Katherine, Vennam, Sujay, Maley, Carlo, Hwang, E. Shelley, Marks, Jeffrey R., Bendall, Sean C., Colditz, Graham A., West, Robert B., Angelo, Michael
Publicado 2022

The immunoregulatory landscape of human tuberculosis granulomas

por McCaffrey, Erin F., Donato, Michele, Keren, Leeat, Chen, Zhenghao, Delmastro, Alea, Fitzpatrick, Megan B., Gupta, Sanjana, Greenwald, Noah F., Baranski, Alex, Graf, William, Kumar, Rashmi, Bosse, Marc, Fullaway, Christine Camacho, Ramdial, Pratista K., Forgó, Erna, Jojic, Vladimir, Van Valen, David, Mehra, Smriti, Khader, Shabaana A., Bendall, Sean C., van de Rijn, Matt, Kalman, Daniel, Kaushal, Deepak, Hunter, Robert L., Banaei, Niaz, Steyn, Adrie J. C., Khatri, Purvesh, Angelo, Michael
Publicado 2022

Author Correction: The immunoregulatory landscape of human tuberculosis granulomas

por McCaffrey, Erin F., Donato, Michele, Keren, Leeat, Chen, Zhenghao, Delmastro, Alea, Fitzpatrick, Megan B., Gupta, Sanjana, Greenwald, Noah F., Baranski, Alex, Graf, William, Kumar, Rashmi, Bosse, Marc, Fullaway, Christine Camacho, Ramdial, Pratista K., Forgó, Erna, Jojic, Vladimir, Van Valen, David, Mehra, Smriti, Khader, Shabaana A., Bendall, Sean C., van de Rijn, Matt, Kalman, Daniel, Kaushal, Deepak, Hunter, Robert L., Banaei, Niaz, Steyn, Adrie J. C., Khatri, Purvesh, Angelo, Michael
Publicado 2022

Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments

por Jiang, Sizun, Chan, Chi Ngai, Rovira-Clavé, Xavier, Chen, Han, Bai, Yunhao, Zhu, Bokai, McCaffrey, Erin, Greenwald, Noah F., Liu, Candace, Barlow, Graham L., Weirather, Jason L., Oliveria, John Paul, Nakayama, Tsuguhisa, Lee, Ivan T., Matter, Matthias S., Carlisle, Anne E., Philips, Darci, Vazquez, Gustavo, Mukherjee, Nilanjan, Busman-Sahay, Kathleen, Nekorchuk, Michael, Terry, Margaret, Younger, Skyler, Bosse, Marc, Demeter, Janos, Rodig, Scott J., Tzankov, Alexandar, Goltsev, Yury, McIlwain, David Robert, Angelo, Michael, Estes, Jacob D., Nolan, Garry P.
Publicado 2022